Strain Fitness in Marinobacter adhaerens HP15 around HP15_2690

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2689 and HP15_2690 are separated by 266 nucleotidesHP15_2690 and HP15_2691 are separated by 32 nucleotides HP15_2689: HP15_2689 - NAD-specific glutamate dehydrogenase, at 2,839,200 to 2,842,586 _2689 HP15_2690: HP15_2690 - transcriptional regulator, AsnC family, at 2,842,853 to 2,843,305 _2690 HP15_2691: HP15_2691 - carbonic anhydrase/acetyltransferase, isoleucine patch superfamily, at 2,843,338 to 2,844,060 _2691 Position (kb) 2842 2843 2844Strain fitness (log2 ratio) -2 -1 0 1at 2841.893 kb on + strand, within HP15_2689at 2841.901 kb on - strand, within HP15_2689at 2841.904 kb on + strand, within HP15_2689at 2842.052 kb on + strand, within HP15_2689at 2842.231 kb on - strand, within HP15_2689at 2842.252 kb on + strandat 2842.440 kb on - strandat 2842.440 kb on - strandat 2842.442 kb on + strandat 2842.529 kb on + strandat 2842.530 kb on - strandat 2842.598 kb on + strandat 2842.598 kb on + strandat 2842.730 kb on - strandat 2842.895 kb on + strandat 2842.940 kb on - strand, within HP15_2690at 2842.988 kb on - strand, within HP15_2690at 2842.988 kb on - strand, within HP15_2690at 2842.988 kb on - strand, within HP15_2690at 2843.107 kb on + strand, within HP15_2690at 2843.252 kb on + strand, within HP15_2690at 2843.284 kb on + strandat 2843.386 kb on + strandat 2843.410 kb on - strandat 2843.468 kb on + strand, within HP15_2691at 2843.558 kb on + strand, within HP15_2691at 2843.561 kb on - strand, within HP15_2691at 2843.566 kb on - strand, within HP15_2691at 2843.690 kb on - strand, within HP15_2691at 2843.753 kb on + strand, within HP15_2691at 2843.758 kb on + strand, within HP15_2691at 2843.885 kb on + strand, within HP15_2691at 2843.915 kb on - strand, within HP15_2691at 2843.947 kb on - strand, within HP15_2691at 2843.972 kb on + strand, within HP15_2691at 2844.152 kb on + strandat 2844.305 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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2,841,893 + HP15_2689 0.80 -0.2
2,841,901 - HP15_2689 0.80 -0.7
2,841,904 + HP15_2689 0.80 -1.3
2,842,052 + HP15_2689 0.84 +1.1
2,842,231 - HP15_2689 0.89 -0.6
2,842,252 + +0.7
2,842,440 - +0.9
2,842,440 - +0.2
2,842,442 + -0.4
2,842,529 + -0.3
2,842,530 - -0.2
2,842,598 + -0.6
2,842,598 + +0.2
2,842,730 - +0.1
2,842,895 + -1.3
2,842,940 - HP15_2690 0.19 -0.8
2,842,988 - HP15_2690 0.30 -1.3
2,842,988 - HP15_2690 0.30 -0.7
2,842,988 - HP15_2690 0.30 -2.1
2,843,107 + HP15_2690 0.56 -0.0
2,843,252 + HP15_2690 0.88 -1.0
2,843,284 + -0.3
2,843,386 + -0.9
2,843,410 - +0.3
2,843,468 + HP15_2691 0.18 -0.1
2,843,558 + HP15_2691 0.30 +0.2
2,843,561 - HP15_2691 0.31 -0.1
2,843,566 - HP15_2691 0.32 -0.0
2,843,690 - HP15_2691 0.49 +0.2
2,843,753 + HP15_2691 0.57 +0.3
2,843,758 + HP15_2691 0.58 +0.3
2,843,885 + HP15_2691 0.76 -1.3
2,843,915 - HP15_2691 0.80 -0.2
2,843,947 - HP15_2691 0.84 +0.1
2,843,972 + HP15_2691 0.88 +0.3
2,844,152 + +0.4
2,844,305 + -0.6

Or see this region's nucleotide sequence