Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2610 and HP15_2611 are separated by 113 nucleotides HP15_2611 and HP15_2612 are separated by 166 nucleotides HP15_2612 and HP15_2613 are separated by 78 nucleotides
HP15_2610: HP15_2610 - D-amino acid dehydrogenase small subunit, at 2,762,711 to 2,763,994
_2610
HP15_2611: HP15_2611 - translation initiation factor SUI1, at 2,764,108 to 2,764,332
_2611
HP15_2612: HP15_2612 - lipoprotein, at 2,764,499 to 2,765,029
_2612
HP15_2613: HP15_2613 - protein belonging to uncharacterized protein family UPF0029, at 2,765,108 to 2,765,713
_2613
Position (kb)
2764
2765 Strain fitness (log2 ratio)
-1
0
1 at 2763.128 kb on + strand, within HP15_2610 at 2763.136 kb on - strand, within HP15_2610 at 2763.188 kb on - strand, within HP15_2610 at 2763.330 kb on + strand, within HP15_2610 at 2763.347 kb on + strand, within HP15_2610 at 2763.355 kb on - strand, within HP15_2610 at 2763.359 kb on + strand, within HP15_2610 at 2763.389 kb on + strand, within HP15_2610 at 2763.389 kb on + strand, within HP15_2610 at 2763.390 kb on - strand, within HP15_2610 at 2763.508 kb on + strand, within HP15_2610 at 2763.540 kb on + strand, within HP15_2610 at 2763.548 kb on - strand, within HP15_2610 at 2763.560 kb on - strand, within HP15_2610 at 2763.572 kb on + strand, within HP15_2610 at 2763.620 kb on + strand, within HP15_2610 at 2763.668 kb on + strand, within HP15_2610 at 2763.707 kb on + strand, within HP15_2610 at 2763.753 kb on + strand, within HP15_2610 at 2763.806 kb on - strand, within HP15_2610 at 2763.877 kb on + strand at 2763.883 kb on + strand at 2764.290 kb on + strand, within HP15_2611 at 2764.292 kb on + strand, within HP15_2611 at 2764.306 kb on - strand, within HP15_2611 at 2764.565 kb on + strand, within HP15_2612 at 2764.573 kb on - strand, within HP15_2612 at 2764.857 kb on - strand, within HP15_2612 at 2764.867 kb on - strand, within HP15_2612 at 2764.986 kb on + strand at 2764.994 kb on - strand at 2764.994 kb on - strand at 2765.067 kb on + strand at 2765.160 kb on + strand at 2765.232 kb on + strand, within HP15_2613
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 2,763,128 + HP15_2610 0.32 -0.9 2,763,136 - HP15_2610 0.33 +0.5 2,763,188 - HP15_2610 0.37 -0.9 2,763,330 + HP15_2610 0.48 +0.7 2,763,347 + HP15_2610 0.50 +0.5 2,763,355 - HP15_2610 0.50 +0.4 2,763,359 + HP15_2610 0.50 -0.3 2,763,389 + HP15_2610 0.53 -0.0 2,763,389 + HP15_2610 0.53 +0.5 2,763,390 - HP15_2610 0.53 -0.1 2,763,508 + HP15_2610 0.62 -0.9 2,763,540 + HP15_2610 0.65 +0.3 2,763,548 - HP15_2610 0.65 +0.2 2,763,560 - HP15_2610 0.66 +0.3 2,763,572 + HP15_2610 0.67 -0.7 2,763,620 + HP15_2610 0.71 -0.1 2,763,668 + HP15_2610 0.75 +0.7 2,763,707 + HP15_2610 0.78 -0.3 2,763,753 + HP15_2610 0.81 -0.2 2,763,806 - HP15_2610 0.85 +0.2 2,763,877 + +0.1 2,763,883 + +0.2 2,764,290 + HP15_2611 0.81 -0.8 2,764,292 + HP15_2611 0.82 -0.2 2,764,306 - HP15_2611 0.88 -0.6 2,764,565 + HP15_2612 0.12 +0.1 2,764,573 - HP15_2612 0.14 -0.4 2,764,857 - HP15_2612 0.67 +0.5 2,764,867 - HP15_2612 0.69 -0.8 2,764,986 + +0.3 2,764,994 - +0.0 2,764,994 - +0.9 2,765,067 + +0.9 2,765,160 + +0.3 2,765,232 + HP15_2613 0.20 -0.3
Or see this region's nucleotide sequence