Strain Fitness in Marinobacter adhaerens HP15 around HP15_2586

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2583 and HP15_2584 overlap by 1 nucleotidesHP15_2584 and HP15_2585 overlap by 4 nucleotidesHP15_2585 and HP15_2586 are separated by 41 nucleotidesHP15_2586 and HP15_2587 are separated by 115 nucleotides HP15_2583: HP15_2583 - monovalent cation/H+ antiporter subunit D, at 2,733,865 to 2,735,382 _2583 HP15_2584: HP15_2584 - pH adaption potassium efflux system protein PhaE, at 2,735,382 to 2,735,870 _2584 HP15_2585: HP15_2585 - multiple resistance and pH regulation protein F, at 2,735,867 to 2,736,136 _2585 HP15_2586: HP15_2586 - monovalent cation/H+ antiporter subunit G, at 2,736,178 to 2,736,510 _2586 HP15_2587: HP15_2587 - monovalent cation/H+ antiporter subunit A, at 2,736,626 to 2,738,935 _2587 Position (kb) 2736 2737Strain fitness (log2 ratio) -1 0 1at 2735.209 kb on - strand, within HP15_2583at 2735.319 kb on - strandat 2735.333 kb on - strandat 2735.364 kb on + strandat 2735.404 kb on + strandat 2735.419 kb on + strandat 2735.478 kb on + strand, within HP15_2584at 2735.564 kb on - strand, within HP15_2584at 2735.619 kb on - strand, within HP15_2584at 2735.676 kb on - strand, within HP15_2584at 2735.915 kb on - strand, within HP15_2585at 2735.984 kb on + strand, within HP15_2585at 2735.992 kb on - strand, within HP15_2585at 2736.011 kb on + strand, within HP15_2585at 2736.121 kb on - strandat 2736.131 kb on - strandat 2736.319 kb on - strand, within HP15_2586at 2736.321 kb on - strand, within HP15_2586at 2736.331 kb on + strand, within HP15_2586at 2736.367 kb on - strand, within HP15_2586at 2736.474 kb on - strand, within HP15_2586at 2736.713 kb on + strandat 2736.713 kb on + strandat 2736.788 kb on + strandat 2736.857 kb on - strand, within HP15_2587at 2736.862 kb on - strand, within HP15_2587at 2736.891 kb on + strand, within HP15_2587at 2736.891 kb on + strand, within HP15_2587at 2737.122 kb on - strand, within HP15_2587at 2737.183 kb on - strand, within HP15_2587at 2737.272 kb on - strand, within HP15_2587at 2737.369 kb on + strand, within HP15_2587at 2737.377 kb on - strand, within HP15_2587

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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2,735,209 - HP15_2583 0.89 +0.7
2,735,319 - -0.3
2,735,333 - +0.4
2,735,364 + -0.5
2,735,404 + -0.4
2,735,419 + -0.8
2,735,478 + HP15_2584 0.20 -0.0
2,735,564 - HP15_2584 0.37 -1.0
2,735,619 - HP15_2584 0.48 +0.4
2,735,676 - HP15_2584 0.60 -1.3
2,735,915 - HP15_2585 0.18 -0.4
2,735,984 + HP15_2585 0.43 -0.4
2,735,992 - HP15_2585 0.46 -1.2
2,736,011 + HP15_2585 0.53 -0.0
2,736,121 - -0.3
2,736,131 - -0.1
2,736,319 - HP15_2586 0.42 -0.7
2,736,321 - HP15_2586 0.43 -0.6
2,736,331 + HP15_2586 0.46 -0.3
2,736,367 - HP15_2586 0.57 -0.3
2,736,474 - HP15_2586 0.89 +0.2
2,736,713 + -0.1
2,736,713 + +0.5
2,736,788 + -0.2
2,736,857 - HP15_2587 0.10 -0.0
2,736,862 - HP15_2587 0.10 -0.1
2,736,891 + HP15_2587 0.11 -0.1
2,736,891 + HP15_2587 0.11 +1.1
2,737,122 - HP15_2587 0.21 +0.1
2,737,183 - HP15_2587 0.24 +0.7
2,737,272 - HP15_2587 0.28 -0.1
2,737,369 + HP15_2587 0.32 +0.4
2,737,377 - HP15_2587 0.33 +0.3

Or see this region's nucleotide sequence