Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2545 and HP15_2546 are separated by 146 nucleotides HP15_2546 and HP15_2547 are separated by 202 nucleotides HP15_2547 and HP15_2548 are separated by 151 nucleotides
HP15_2545: HP15_2545 - oxidoreductase, zinc-binding dehydrogenase family protein, at 2,691,846 to 2,692,826
_2545
HP15_2546: HP15_2546 - BLUF domain protein, at 2,692,973 to 2,693,530
_2546
HP15_2547: HP15_2547 - membrane protein containing uncharacterized protein family UPF0126 domains, at 2,693,733 to 2,694,350
_2547
HP15_2548: HP15_2548 - xanthine/uracil permease family protein, at 2,694,502 to 2,695,800
_2548
Position (kb)
2693
2694
2695 Strain fitness (log2 ratio)
-1
0
1 at 2692.819 kb on + strand at 2692.883 kb on + strand at 2692.976 kb on + strand at 2692.979 kb on - strand at 2693.056 kb on + strand, within HP15_2546 at 2693.155 kb on + strand, within HP15_2546 at 2693.155 kb on + strand, within HP15_2546 at 2693.162 kb on + strand, within HP15_2546 at 2693.163 kb on - strand, within HP15_2546 at 2693.163 kb on - strand, within HP15_2546 at 2693.163 kb on - strand, within HP15_2546 at 2693.163 kb on - strand, within HP15_2546 at 2693.163 kb on - strand, within HP15_2546 at 2693.163 kb on - strand, within HP15_2546 at 2693.184 kb on - strand, within HP15_2546 at 2693.527 kb on - strand at 2693.544 kb on + strand at 2693.628 kb on + strand at 2693.708 kb on + strand at 2693.866 kb on + strand, within HP15_2547 at 2693.866 kb on + strand, within HP15_2547 at 2693.996 kb on + strand, within HP15_2547 at 2694.185 kb on - strand, within HP15_2547 at 2694.359 kb on - strand at 2694.492 kb on + strand at 2694.534 kb on + strand at 2694.686 kb on - strand, within HP15_2548 at 2694.789 kb on - strand, within HP15_2548 at 2694.811 kb on + strand, within HP15_2548 at 2694.819 kb on - strand, within HP15_2548 at 2694.848 kb on + strand, within HP15_2548 at 2694.856 kb on - strand, within HP15_2548 at 2694.856 kb on - strand, within HP15_2548 at 2694.927 kb on - strand, within HP15_2548 at 2695.171 kb on + strand, within HP15_2548 at 2695.257 kb on + strand, within HP15_2548 at 2695.265 kb on - strand, within HP15_2548 at 2695.291 kb on - strand, within HP15_2548
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 2,692,819 + +0.2 2,692,883 + +0.5 2,692,976 + -0.1 2,692,979 - +0.5 2,693,056 + HP15_2546 0.15 +0.0 2,693,155 + HP15_2546 0.33 -0.2 2,693,155 + HP15_2546 0.33 -0.3 2,693,162 + HP15_2546 0.34 -0.6 2,693,163 - HP15_2546 0.34 -0.6 2,693,163 - HP15_2546 0.34 -0.2 2,693,163 - HP15_2546 0.34 +0.9 2,693,163 - HP15_2546 0.34 +0.7 2,693,163 - HP15_2546 0.34 +0.3 2,693,163 - HP15_2546 0.34 -0.3 2,693,184 - HP15_2546 0.38 -0.3 2,693,527 - +0.1 2,693,544 + -0.3 2,693,628 + +0.7 2,693,708 + +0.5 2,693,866 + HP15_2547 0.22 -0.6 2,693,866 + HP15_2547 0.22 -0.0 2,693,996 + HP15_2547 0.43 -1.7 2,694,185 - HP15_2547 0.73 -0.2 2,694,359 - +0.3 2,694,492 + +0.3 2,694,534 + -0.8 2,694,686 - HP15_2548 0.14 -0.4 2,694,789 - HP15_2548 0.22 -0.5 2,694,811 + HP15_2548 0.24 +0.7 2,694,819 - HP15_2548 0.24 +0.2 2,694,848 + HP15_2548 0.27 +0.8 2,694,856 - HP15_2548 0.27 -0.3 2,694,856 - HP15_2548 0.27 -1.3 2,694,927 - HP15_2548 0.33 +0.6 2,695,171 + HP15_2548 0.52 +0.3 2,695,257 + HP15_2548 0.58 -0.3 2,695,265 - HP15_2548 0.59 +0.3 2,695,291 - HP15_2548 0.61 -0.5
Or see this region's nucleotide sequence