Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1239 and HP15_1240 are separated by 416 nucleotides HP15_1240 and HP15_1241 are separated by 9 nucleotides HP15_1241 and HP15_1242 are separated by 97 nucleotides HP15_1242 and HP15_1243 are separated by 2 nucleotides
HP15_1239: HP15_1239 - phosphoribosylformylglycinamidine synthase, at 1,290,491 to 1,294,396
_1239
HP15_1240: HP15_1240 - conserved hypothetical protein, at 1,294,813 to 1,295,124
_1240
HP15_1241: HP15_1241 - ADP-ribose pyrophosphatase, at 1,295,134 to 1,295,685
_1241
HP15_1242: HP15_1242 - MutT/nudix family protein, at 1,295,783 to 1,296,370
_1242
HP15_1243: HP15_1243 - transferase hexapeptide repeat containing protein, at 1,296,373 to 1,296,906
_1243
Position (kb)
1295
1296 Strain fitness (log2 ratio)
-1
0
1 at 1294.716 kb on + strand at 1294.762 kb on - strand at 1294.768 kb on + strand at 1294.837 kb on - strand at 1295.078 kb on - strand, within HP15_1240 at 1295.090 kb on - strand, within HP15_1240 at 1295.197 kb on + strand, within HP15_1241 at 1295.323 kb on + strand, within HP15_1241 at 1295.323 kb on + strand, within HP15_1241 at 1295.363 kb on - strand, within HP15_1241 at 1295.409 kb on - strand, within HP15_1241 at 1295.498 kb on + strand, within HP15_1241 at 1295.626 kb on + strand, within HP15_1241 at 1295.677 kb on - strand at 1295.783 kb on - strand at 1295.814 kb on + strand at 1295.847 kb on - strand, within HP15_1242 at 1295.855 kb on + strand, within HP15_1242 at 1296.070 kb on + strand, within HP15_1242 at 1296.078 kb on - strand, within HP15_1242 at 1296.137 kb on - strand, within HP15_1242 at 1296.355 kb on + strand at 1296.363 kb on - strand at 1296.445 kb on + strand, within HP15_1243 at 1296.453 kb on - strand, within HP15_1243 at 1296.494 kb on - strand, within HP15_1243 at 1296.554 kb on + strand, within HP15_1243 at 1296.562 kb on - strand, within HP15_1243 at 1296.562 kb on - strand, within HP15_1243 at 1296.562 kb on - strand, within HP15_1243 at 1296.576 kb on + strand, within HP15_1243 at 1296.592 kb on - strand, within HP15_1243 at 1296.594 kb on + strand, within HP15_1243 at 1296.594 kb on + strand, within HP15_1243 at 1296.594 kb on + strand, within HP15_1243 at 1296.594 kb on + strand, within HP15_1243 at 1296.594 kb on + strand, within HP15_1243 at 1296.594 kb on + strand, within HP15_1243 at 1296.594 kb on + strand, within HP15_1243 at 1296.594 kb on + strand, within HP15_1243 at 1296.602 kb on - strand, within HP15_1243 at 1296.602 kb on - strand, within HP15_1243 at 1296.602 kb on - strand, within HP15_1243 at 1296.620 kb on + strand, within HP15_1243
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 1,294,716 + +0.3 1,294,762 - -0.5 1,294,768 + -0.1 1,294,837 - +0.2 1,295,078 - HP15_1240 0.85 +0.7 1,295,090 - HP15_1240 0.89 +0.5 1,295,197 + HP15_1241 0.11 -1.0 1,295,323 + HP15_1241 0.34 -0.6 1,295,323 + HP15_1241 0.34 +0.2 1,295,363 - HP15_1241 0.41 -0.6 1,295,409 - HP15_1241 0.50 -1.7 1,295,498 + HP15_1241 0.66 +0.6 1,295,626 + HP15_1241 0.89 -0.3 1,295,677 - +1.3 1,295,783 - +0.5 1,295,814 + +0.7 1,295,847 - HP15_1242 0.11 +0.2 1,295,855 + HP15_1242 0.12 -0.1 1,296,070 + HP15_1242 0.49 +0.0 1,296,078 - HP15_1242 0.50 -0.3 1,296,137 - HP15_1242 0.60 -0.4 1,296,355 + -0.4 1,296,363 - +1.2 1,296,445 + HP15_1243 0.13 +1.2 1,296,453 - HP15_1243 0.15 -0.3 1,296,494 - HP15_1243 0.23 +0.5 1,296,554 + HP15_1243 0.34 -1.5 1,296,562 - HP15_1243 0.35 +0.1 1,296,562 - HP15_1243 0.35 +0.1 1,296,562 - HP15_1243 0.35 -0.6 1,296,576 + HP15_1243 0.38 +0.7 1,296,592 - HP15_1243 0.41 +0.2 1,296,594 + HP15_1243 0.41 -0.7 1,296,594 + HP15_1243 0.41 +0.0 1,296,594 + HP15_1243 0.41 +0.4 1,296,594 + HP15_1243 0.41 -1.3 1,296,594 + HP15_1243 0.41 +0.4 1,296,594 + HP15_1243 0.41 -0.3 1,296,594 + HP15_1243 0.41 +0.2 1,296,594 + HP15_1243 0.41 +0.3 1,296,602 - HP15_1243 0.43 -0.1 1,296,602 - HP15_1243 0.43 -0.2 1,296,602 - HP15_1243 0.43 +0.7 1,296,620 + HP15_1243 0.46 +1.2
Or see this region's nucleotide sequence