Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4575

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
5,304,299	-		Pf6N2E2_4573	0.85	+0.1
5,304,310	+		Pf6N2E2_4573	0.85	+0.4
5,304,311	-		Pf6N2E2_4573	0.85	-0.4
5,304,311	-		Pf6N2E2_4573	0.85	-0.0
5,304,490	+				-0.3
5,304,490	+				+0.7
5,304,490	+				+0.8
5,304,490	+				+1.3
5,304,491	-				-1.3
5,304,491	-				-1.0
5,304,491	-				+0.3
5,304,491	-				+0.1
5,304,491	-				-0.1
5,304,491	-				+0.9
5,304,491	-				-1.3
5,304,491	-				+1.2
5,304,557	+				-0.4
5,304,557	+				+1.1
5,304,557	+				+0.4
5,304,557	+				+0.0
5,304,557	+				-1.0
5,304,557	+				-0.2
5,304,557	+				-0.8
5,304,557	+				-0.3
5,304,557	+				+0.6
5,304,558	-				-0.1
5,304,558	-				-1.4
5,304,558	-				-0.5
5,304,558	-				-0.1
5,304,558	-				+0.5
5,304,560	+				+0.4
5,304,560	+				-0.1
5,304,560	+				-0.2
5,304,560	+				-1.2
5,304,560	+				+0.4
5,304,561	-				-1.2
5,304,561	-				-0.1
5,304,561	-				-0.3
5,304,561	-				+0.5
5,304,563	+				+0.9
5,304,683	-		Pf6N2E2_4574	0.10	+0.6
5,304,716	+		Pf6N2E2_4574	0.16	-0.7
5,304,716	+		Pf6N2E2_4574	0.16	-0.0
5,304,716	+		Pf6N2E2_4574	0.16	+0.3
5,304,716	+		Pf6N2E2_4574	0.16	-0.0
5,304,717	-		Pf6N2E2_4574	0.16	+0.1
5,304,717	-		Pf6N2E2_4574	0.16	+1.3
5,304,717	-		Pf6N2E2_4574	0.16	+0.0
5,304,717	-		Pf6N2E2_4574	0.16	-0.5
5,304,717	-		Pf6N2E2_4574	0.16	+0.4
5,305,152	-				+1.5
5,305,174	-				+1.0
5,305,179	+				-0.2
5,305,179	+				-0.2
5,305,179	+				+0.3
5,305,179	+				+0.4
5,305,255	+				+0.3
5,305,480	+		Pf6N2E2_4575	0.20	+0.2
5,305,481	-		Pf6N2E2_4575	0.20	+0.6
5,305,484	-		Pf6N2E2_4575	0.20	+0.8
5,305,516	+		Pf6N2E2_4575	0.22	-0.0
5,305,516	+		Pf6N2E2_4575	0.22	-0.6
5,305,516	+		Pf6N2E2_4575	0.22	+1.6
5,305,516	+		Pf6N2E2_4575	0.22	+0.6
5,305,516	+		Pf6N2E2_4575	0.22	+0.2
5,305,516	+		Pf6N2E2_4575	0.22	+0.1
5,305,517	-		Pf6N2E2_4575	0.22	+1.2
5,305,517	-		Pf6N2E2_4575	0.22	-0.3
5,305,517	-		Pf6N2E2_4575	0.22	-1.2
5,305,517	-		Pf6N2E2_4575	0.22	+0.3
5,305,517	-		Pf6N2E2_4575	0.22	+0.4
5,305,517	-		Pf6N2E2_4575	0.22	-0.2
5,305,517	-		Pf6N2E2_4575	0.22	+0.8
5,305,517	-		Pf6N2E2_4575	0.22	+1.2
5,305,544	-		Pf6N2E2_4575	0.24	-0.1
5,305,744	+		Pf6N2E2_4575	0.38	+0.2
5,305,744	+		Pf6N2E2_4575	0.38	-0.9
5,305,744	+		Pf6N2E2_4575	0.38	-0.3
5,305,744	+		Pf6N2E2_4575	0.38	-0.7
5,305,745	-		Pf6N2E2_4575	0.38	+1.7
5,305,840	+		Pf6N2E2_4575	0.45	-0.4
5,305,840	+		Pf6N2E2_4575	0.45	+0.0
5,305,841	-		Pf6N2E2_4575	0.45	+1.9
5,305,841	-		Pf6N2E2_4575	0.45	+0.7
5,306,209	-		Pf6N2E2_4575	0.71	+0.7
5,306,239	+		Pf6N2E2_4575	0.73	-0.1
5,306,239	+		Pf6N2E2_4575	0.73	-0.2
5,306,239	+		Pf6N2E2_4575	0.73	-0.4
5,306,240	-		Pf6N2E2_4575	0.73	+0.7
5,306,240	-		Pf6N2E2_4575	0.73	+1.3
5,306,240	-		Pf6N2E2_4575	0.73	+1.0
5,306,281	+		Pf6N2E2_4575	0.76	+1.1
5,306,281	+		Pf6N2E2_4575	0.76	-0.3
5,306,281	+		Pf6N2E2_4575	0.76	-0.8
5,306,282	-		Pf6N2E2_4575	0.76	+0.6
5,306,369	-		Pf6N2E2_4575	0.82	+0.1
5,306,481	+		Pf6N2E2_4575	0.90	-2.3
5,306,482	-		Pf6N2E2_4575	0.90	+2.6
5,306,482	-		Pf6N2E2_4575	0.90	+1.1
5,306,546	-				-0.8
5,306,611	+				+0.6
5,306,611	+				-0.7
5,306,611	+				+0.9
5,306,645	+				+0.1
5,306,646	-				+0.5
5,306,648	+				-0.2
5,306,648	+				-0.1
5,306,648	+				-1.0
5,306,648	+				+0.3
5,306,648	+				-0.9
5,306,648	+				+0.5
5,306,648	+				+0.2
5,306,648	+				+1.9
5,306,649	-				+0.1
5,306,649	-				+1.2
5,306,649	-				+0.8
5,306,649	-				+0.1
5,306,651	+				+0.6
5,306,651	+				+1.0
5,306,651	+				+0.3
5,306,651	+				+0.1
5,306,652	-				+0.9
5,306,652	-				+0.9
5,306,652	-				+0.3
5,306,652	-				+1.0
5,306,652	-				-0.5
5,306,674	+				-1.1
5,306,675	-				+0.6
5,306,675	-				+0.5
5,306,675	-				-1.1
5,306,675	-				+1.9
5,306,675	-				-1.3
5,306,676	+				+0.8
5,306,677	-				+1.4
5,306,737	+				+0.9
5,306,737	+				+0.0
5,306,737	+				+0.5
5,306,738	-				+0.6
5,306,738	-				-0.7
5,306,738	-				+0.4
5,306,766	+				+0.2
5,306,767	-				+1.0
5,306,908	+		Pf6N2E2_4576	0.18	+2.6
5,306,909	-		Pf6N2E2_4576	0.18	-1.1
5,306,909	-		Pf6N2E2_4576	0.18	+0.3
5,306,912	-		Pf6N2E2_4576	0.18	+1.1
5,306,960	-		Pf6N2E2_4576	0.26	-0.4
5,306,960	-		Pf6N2E2_4576	0.26	+0.5
5,306,960	-		Pf6N2E2_4576	0.26	+0.5
5,307,031	+		Pf6N2E2_4576	0.36	-0.3
5,307,031	+		Pf6N2E2_4576	0.36	+0.6
5,307,032	-		Pf6N2E2_4576	0.37	+0.1
5,307,032	-		Pf6N2E2_4576	0.37	+0.6
5,307,168	+		Pf6N2E2_4576	0.57	-0.5
5,307,169	-		Pf6N2E2_4576	0.57	+1.8
5,307,169	-		Pf6N2E2_4576	0.57	-1.0
5,307,172	+		Pf6N2E2_4576	0.58	-0.2
5,307,172	+		Pf6N2E2_4576	0.58	+0.2
5,307,172	+		Pf6N2E2_4576	0.58	+0.1
5,307,172	+		Pf6N2E2_4576	0.58	-0.5
5,307,172	+		Pf6N2E2_4576	0.58	+1.5
5,307,172	+		Pf6N2E2_4576	0.58	+1.9
5,307,173	-		Pf6N2E2_4576	0.58	+1.5
5,307,173	-		Pf6N2E2_4576	0.58	+0.3
5,307,173	-		Pf6N2E2_4576	0.58	+0.6
5,307,173	-		Pf6N2E2_4576	0.58	+0.4
5,307,173	-		Pf6N2E2_4576	0.58	+0.3
5,307,173	-		Pf6N2E2_4576	0.58	+1.9
5,307,334	+		Pf6N2E2_4576	0.82	-0.4
5,307,341	+		Pf6N2E2_4576	0.83	+0.8
5,307,341	+		Pf6N2E2_4576	0.83	-0.7
5,307,341	+		Pf6N2E2_4576	0.83	+0.6
5,307,341	+		Pf6N2E2_4576	0.83	+0.3
5,307,342	-		Pf6N2E2_4576	0.83	+0.5
5,307,342	-		Pf6N2E2_4576	0.83	-0.4
5,307,409	+				-0.3
5,307,409	+				+0.8
5,307,410	-				+1.1
5,307,410	-				+1.5
5,307,412	+				+0.2
5,307,412	+				+1.0
5,307,412	+				+0.3
5,307,412	+				-1.7
5,307,412	+				+0.2
5,307,412	+				+0.1
5,307,412	+				+0.6
5,307,412	+				+0.3
5,307,412	+				+0.9
5,307,412	+				-1.0
5,307,412	+				+0.9
5,307,412	+				-0.3
5,307,413	-				-0.4
5,307,413	-				+1.1
5,307,413	-				-0.1
5,307,413	-				+0.3
5,307,413	-				+0.3
5,307,413	-				-0.2
5,307,413	-				-1.4
5,307,413	-				-0.2
5,307,413	-				-0.6
5,307,413	-				+0.9
5,307,413	-				+0.6
5,307,413	-				-0.5
5,307,448	+				+0.1
5,307,449	-				-0.1
5,307,449	-				+0.9
5,307,587	+		Pf6N2E2_4577	0.12	+0.2
5,307,588	-		Pf6N2E2_4577	0.12	-0.6
5,307,603	-		Pf6N2E2_4577	0.14	+1.5
5,307,603	-		Pf6N2E2_4577	0.14	-0.6