Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3335

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,855,207	+		Pf6N2E2_3334	0.36	-0.9
3,855,207	+		Pf6N2E2_3334	0.36	+0.6
3,855,207	+		Pf6N2E2_3334	0.36	-0.2
3,855,207	+		Pf6N2E2_3334	0.36	+1.3
3,855,207	+		Pf6N2E2_3334	0.36	-0.1
3,855,208	-		Pf6N2E2_3334	0.36	+0.7
3,855,208	-		Pf6N2E2_3334	0.36	-1.3
3,855,208	-		Pf6N2E2_3334	0.36	+0.6
3,855,211	+		Pf6N2E2_3334	0.36	-0.4
3,855,211	+		Pf6N2E2_3334	0.36	-0.1
3,855,211	+		Pf6N2E2_3334	0.36	+0.7
3,855,211	+		Pf6N2E2_3334	0.36	-0.5
3,855,211	+		Pf6N2E2_3334	0.36	+0.4
3,855,212	-		Pf6N2E2_3334	0.36	+1.1
3,855,212	-		Pf6N2E2_3334	0.36	+0.7
3,855,212	-		Pf6N2E2_3334	0.36	-0.8
3,855,483	+		Pf6N2E2_3334	0.60	-0.3
3,855,483	+		Pf6N2E2_3334	0.60	+1.1
3,855,483	+		Pf6N2E2_3334	0.60	+1.4
3,855,484	-		Pf6N2E2_3334	0.60	-0.4
3,855,484	-		Pf6N2E2_3334	0.60	+0.9
3,855,484	-		Pf6N2E2_3334	0.60	+0.8
3,855,484	-		Pf6N2E2_3334	0.60	+1.0
3,855,484	-		Pf6N2E2_3334	0.60	+0.3
3,855,484	-		Pf6N2E2_3334	0.60	+0.8
3,855,484	-		Pf6N2E2_3334	0.60	-0.6
3,855,513	+		Pf6N2E2_3334	0.62	+1.0
3,855,513	+		Pf6N2E2_3334	0.62	+0.4
3,855,645	-		Pf6N2E2_3334	0.73	-0.8
3,855,675	+		Pf6N2E2_3334	0.76	+0.5
3,855,675	+		Pf6N2E2_3334	0.76	+0.7
3,855,676	-		Pf6N2E2_3334	0.76	+1.4
3,855,813	+		Pf6N2E2_3334	0.88	-1.7
3,855,813	+		Pf6N2E2_3334	0.88	-0.3
3,855,814	-		Pf6N2E2_3334	0.88	+0.6
3,855,814	-		Pf6N2E2_3334	0.88	+0.6
3,855,814	-		Pf6N2E2_3334	0.88	+1.4
3,855,814	-		Pf6N2E2_3334	0.88	-0.8
3,855,822	+		Pf6N2E2_3334	0.89	+0.7
3,855,822	+		Pf6N2E2_3334	0.89	-0.7
3,855,822	+		Pf6N2E2_3334	0.89	+0.2
3,855,823	-		Pf6N2E2_3334	0.89	+0.5
3,855,828	+		Pf6N2E2_3334	0.89	+1.0
3,855,828	+		Pf6N2E2_3334	0.89	+0.6
3,855,828	+		Pf6N2E2_3334	0.89	+0.4
3,855,828	+		Pf6N2E2_3334	0.89	-0.6
3,855,828	+		Pf6N2E2_3334	0.89	+0.6
3,855,828	+		Pf6N2E2_3334	0.89	-0.9
3,855,828	+		Pf6N2E2_3334	0.89	+0.1
3,855,828	+		Pf6N2E2_3334	0.89	+0.8
3,855,828	+		Pf6N2E2_3334	0.89	-0.4
3,855,829	-		Pf6N2E2_3334	0.89	-1.7
3,855,867	+				+0.7
3,855,888	+				+0.2
3,855,889	-				-1.0
3,855,889	-				+0.3
3,855,889	-				-1.7
3,855,890	+				-1.4
3,855,890	+				+0.8
3,855,890	+				+0.3
3,855,890	+				-0.3
3,855,891	-				-2.0
3,855,900	+				+0.0
3,855,900	+				-0.1
3,855,945	+				-0.0
3,855,945	+				-1.0
3,855,945	+				-0.2
3,856,056	+				+0.6
3,856,057	-				-0.7
3,856,057	-				-0.2
3,856,057	-				-0.5
3,856,057	-				+0.4
3,856,153	+				+0.6
3,856,153	+				+1.6
3,856,153	+				+0.2
3,856,153	+				+1.6
3,856,175	+				+0.3
3,856,175	+				-0.6
3,856,175	+				+0.3
3,856,175	+				-0.3
3,856,176	-				-1.1
3,856,502	+		Pf6N2E2_3335	0.13	-1.8
3,856,503	-		Pf6N2E2_3335	0.13	-0.3
3,856,515	-		Pf6N2E2_3335	0.13	+1.6
3,856,515	-		Pf6N2E2_3335	0.13	-0.7
3,856,515	-		Pf6N2E2_3335	0.13	-1.1
3,856,664	+		Pf6N2E2_3335	0.19	-1.0
3,856,664	+		Pf6N2E2_3335	0.19	-1.6
3,856,664	+		Pf6N2E2_3335	0.19	+0.0
3,856,665	-		Pf6N2E2_3335	0.19	-0.9
3,856,665	-		Pf6N2E2_3335	0.19	-1.3
3,856,665	-		Pf6N2E2_3335	0.19	-0.0
3,856,665	-		Pf6N2E2_3335	0.19	-0.5
3,856,787	+		Pf6N2E2_3335	0.24	-0.4
3,856,787	+		Pf6N2E2_3335	0.24	-0.6
3,856,788	-		Pf6N2E2_3335	0.24	-1.1
3,856,788	-		Pf6N2E2_3335	0.24	+0.1
3,856,791	+		Pf6N2E2_3335	0.24	-1.6
3,856,792	-		Pf6N2E2_3335	0.24	-0.8
3,856,792	-		Pf6N2E2_3335	0.24	+0.8
3,856,823	+		Pf6N2E2_3335	0.25	-1.2
3,856,824	-		Pf6N2E2_3335	0.25	-2.0
3,856,824	-		Pf6N2E2_3335	0.25	-2.5
3,856,832	+		Pf6N2E2_3335	0.26	-1.6
3,856,833	-		Pf6N2E2_3335	0.26	-2.0
3,856,955	+		Pf6N2E2_3335	0.31	-0.9
3,856,955	+		Pf6N2E2_3335	0.31	+0.6
3,856,955	+		Pf6N2E2_3335	0.31	-1.0
3,856,955	+		Pf6N2E2_3335	0.31	-1.1
3,856,955	+		Pf6N2E2_3335	0.31	-0.8
3,856,956	-		Pf6N2E2_3335	0.31	-2.0
3,856,956	-		Pf6N2E2_3335	0.31	-0.5
3,856,956	-		Pf6N2E2_3335	0.31	-0.6
3,856,956	-		Pf6N2E2_3335	0.31	-0.2
3,856,956	-		Pf6N2E2_3335	0.31	-2.0
3,856,985	+		Pf6N2E2_3335	0.32	-1.8
3,856,985	+		Pf6N2E2_3335	0.32	-1.3
3,856,985	+		Pf6N2E2_3335	0.32	-2.4
3,856,985	+		Pf6N2E2_3335	0.32	-0.0
3,856,985	+		Pf6N2E2_3335	0.32	-0.2
3,856,985	+		Pf6N2E2_3335	0.32	-0.2
3,856,986	-		Pf6N2E2_3335	0.32	-0.5
3,856,986	-		Pf6N2E2_3335	0.32	-1.6
3,856,986	-		Pf6N2E2_3335	0.32	+0.9
3,857,162	+		Pf6N2E2_3335	0.39	-2.1
3,857,162	+		Pf6N2E2_3335	0.39	-1.1
3,857,162	+		Pf6N2E2_3335	0.39	-0.5
3,857,163	-		Pf6N2E2_3335	0.39	-1.8
3,857,183	+		Pf6N2E2_3335	0.40	-0.7
3,857,183	+		Pf6N2E2_3335	0.40	-0.6
3,857,184	-		Pf6N2E2_3335	0.40	-1.8
3,857,264	+		Pf6N2E2_3335	0.43	-0.7
3,857,265	-		Pf6N2E2_3335	0.43	-0.2
3,857,624	+		Pf6N2E2_3335	0.57	+0.0
3,857,625	-		Pf6N2E2_3335	0.57	-1.0
3,857,625	-		Pf6N2E2_3335	0.57	-2.0
3,857,625	-		Pf6N2E2_3335	0.57	-2.2
3,857,726	+		Pf6N2E2_3335	0.61	-1.1
3,857,726	+		Pf6N2E2_3335	0.61	-0.5
3,857,866	-		Pf6N2E2_3335	0.66	-0.4
3,857,867	+		Pf6N2E2_3335	0.66	-1.0
3,857,867	+		Pf6N2E2_3335	0.66	-0.7
3,857,868	-		Pf6N2E2_3335	0.66	-0.7
3,857,868	-		Pf6N2E2_3335	0.66	-2.2
3,857,868	-		Pf6N2E2_3335	0.66	-1.1
3,857,868	-		Pf6N2E2_3335	0.66	-0.2
3,857,868	-		Pf6N2E2_3335	0.66	-2.6
3,857,868	-		Pf6N2E2_3335	0.66	-1.0
3,858,134	+		Pf6N2E2_3335	0.77	+0.5
3,858,134	+		Pf6N2E2_3335	0.77	-1.5
3,858,135	-		Pf6N2E2_3335	0.77	-1.1
3,858,390	+		Pf6N2E2_3335	0.87	-1.0
3,858,390	+		Pf6N2E2_3335	0.87	-1.8
3,858,530	+				-2.8
3,858,530	+				-1.7
3,858,531	-				-0.1
3,858,599	+				-3.7
3,858,599	+				-0.6
3,858,599	+				-1.8
3,858,599	+				-1.8
3,858,599	+				-0.7
3,858,600	-				-1.6
3,858,600	-				-1.7
3,858,600	-				-2.4
3,858,600	-				-1.6
3,858,600	-				-1.1
3,858,600	-				-1.4
3,858,600	-				-1.2
3,858,600	-				-3.1
3,858,716	+				-0.5
3,858,717	-				-2.4
3,858,825	+				+0.6
3,858,825	+				-0.3
3,858,825	+				+0.3
3,858,825	+				+1.4
3,858,825	+				-0.2
3,858,825	+				+1.1
3,858,825	+				+0.3
3,858,825	+				+0.6
3,858,825	+				-0.7
3,858,826	-				+0.2
3,858,826	-				-0.2
3,858,826	-				-0.3
3,858,826	-				-0.7
3,859,138	+		Pf6N2E2_3336	0.18	+1.3
3,859,139	-		Pf6N2E2_3336	0.18	-0.8
3,859,156	+		Pf6N2E2_3336	0.19	+1.4
3,859,156	+		Pf6N2E2_3336	0.19	+0.7
3,859,157	-		Pf6N2E2_3336	0.19	-0.9
3,859,157	-		Pf6N2E2_3336	0.19	+1.1
3,859,157	-		Pf6N2E2_3336	0.19	-0.9
3,859,157	-		Pf6N2E2_3336	0.19	-1.2
3,859,183	+		Pf6N2E2_3336	0.21	+0.9
3,859,183	+		Pf6N2E2_3336	0.21	+1.4
3,859,183	+		Pf6N2E2_3336	0.21	+0.2
3,859,183	+		Pf6N2E2_3336	0.21	+0.5
3,859,183	+		Pf6N2E2_3336	0.21	+0.3
3,859,183	+		Pf6N2E2_3336	0.21	-1.7
3,859,183	+		Pf6N2E2_3336	0.21	+0.3
3,859,183	+		Pf6N2E2_3336	0.21	-0.2
3,859,183	+		Pf6N2E2_3336	0.21	-0.1
3,859,183	+		Pf6N2E2_3336	0.21	+1.5
3,859,183	-		Pf6N2E2_3336	0.21	+1.3
3,859,184	-		Pf6N2E2_3336	0.21	+1.2
3,859,184	-		Pf6N2E2_3336	0.21	+0.6
3,859,184	-		Pf6N2E2_3336	0.21	+0.4
3,859,184	-		Pf6N2E2_3336	0.21	+0.7
3,859,184	-		Pf6N2E2_3336	0.21	-0.1
3,859,184	-		Pf6N2E2_3336	0.21	+0.5
3,859,184	-		Pf6N2E2_3336	0.21	-0.6
3,859,184	-		Pf6N2E2_3336	0.21	+0.8
3,859,210	+		Pf6N2E2_3336	0.23	+0.8
3,859,210	+		Pf6N2E2_3336	0.23	-0.6
3,859,211	-		Pf6N2E2_3336	0.23	+0.2
3,859,512	-		Pf6N2E2_3336	0.42	+1.3
3,859,512	-		Pf6N2E2_3336	0.42	+0.9
3,859,512	-		Pf6N2E2_3336	0.42	-0.0
3,859,517	-		Pf6N2E2_3336	0.43	-0.3
3,859,561	+		Pf6N2E2_3336	0.45	-0.8
3,859,693	-		Pf6N2E2_3336	0.54	+0.9
3,859,693	-		Pf6N2E2_3336	0.54	-0.2
3,859,693	-		Pf6N2E2_3336	0.54	+0.7
3,859,714	-		Pf6N2E2_3336	0.55	-1.7