Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3046 and Pf6N2E2_3047 are separated by 8 nucleotides Pf6N2E2_3047 and Pf6N2E2_3048 are separated by 171 nucleotides Pf6N2E2_3048 and Pf6N2E2_3049 are separated by 204 nucleotides
Pf6N2E2_3046 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60), at 3,529,910 to 3,530,605
_3046
Pf6N2E2_3047 - Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage, at 3,530,614 to 3,530,892
_3047
Pf6N2E2_3048 - Enolase (EC 4.2.1.11), at 3,531,064 to 3,532,353
_3048
Pf6N2E2_3049 - 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55), at 3,532,558 to 3,533,403
_3049
Position (kb)
3531
3532
3533 Strain fitness (log2 ratio)
-2
-1
0
1 at 3531.036 kb on - strand at 3531.036 kb on - strand at 3531.059 kb on - strand at 3531.059 kb on - strand at 3531.093 kb on - strand at 3531.093 kb on - strand at 3531.093 kb on - strand at 3531.093 kb on - strand at 3531.093 kb on - strand at 3532.379 kb on - strand at 3532.379 kb on - strand at 3532.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 3,531,036 - -0.7 3,531,036 - -0.9 3,531,059 - -0.4 3,531,059 - -1.1 3,531,093 - -1.2 3,531,093 - -2.2 3,531,093 - -0.7 3,531,093 - -0.3 3,531,093 - -0.5 3,532,379 - -0.9 3,532,379 - +0.7 3,532,379 - -0.8
Or see this region's nucleotide sequence