Experiment: Formate/Acetate-Sulfate (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0218 and DVU0219 are separated by 8 nucleotides DVU0219 and DVU0220 overlap by 8 nucleotides
DVU0218: DVU0218 - tail protein, putative (TIGR), at 258,050 to 259,111
DVU0218
DVU0219: DVU0219 - tail protein, putative (TIGR), at 259,120 to 259,746
DVU0219
DVU0220: DVU0220 - tail fiber protein, putative (TIGR), at 259,739 to 260,755
DVU0220
Position (kb) 259
260 Strain fitness (log2 ratio) -2
-1
0
1
2 at 258.221 kb on + strand, within DVU0218 at 258.274 kb on + strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.694 kb on + strand, within DVU0218 at 258.757 kb on - strand, within DVU0218 at 258.757 kb on - strand, within DVU0218 at 259.106 kb on + strand at 259.106 kb on + strand at 259.106 kb on + strand at 259.133 kb on - strand at 259.133 kb on - strand at 259.133 kb on - strand at 259.133 kb on - strand at 259.148 kb on - strand at 259.170 kb on + strand at 259.259 kb on + strand, within DVU0219 at 259.259 kb on + strand, within DVU0219 at 259.259 kb on + strand, within DVU0219 at 259.267 kb on - strand, within DVU0219 at 259.398 kb on + strand, within DVU0219 at 259.845 kb on - strand, within DVU0220 at 259.845 kb on - strand, within DVU0220 at 260.035 kb on - strand, within DVU0220 at 260.088 kb on - strand, within DVU0220 at 260.152 kb on - strand, within DVU0220 at 260.189 kb on - strand, within DVU0220 at 260.234 kb on + strand, within DVU0220 at 260.234 kb on + strand, within DVU0220 at 260.237 kb on - strand, within DVU0220 at 260.242 kb on - strand, within DVU0220 at 260.270 kb on + strand, within DVU0220 at 260.360 kb on - strand, within DVU0220 at 260.360 kb on - strand, within DVU0220 at 260.374 kb on - strand, within DVU0220 at 260.440 kb on - strand, within DVU0220 at 260.445 kb on - strand, within DVU0220 at 260.563 kb on + strand, within DVU0220 at 260.584 kb on + strand, within DVU0220 at 260.592 kb on - strand, within DVU0220 at 260.620 kb on + strand, within DVU0220 at 260.662 kb on - strand at 260.677 kb on - strand at 260.730 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/30-60 mM) remove 258,221 + DVU0218 0.16 -0.3 258,274 + DVU0218 0.21 -0.4 258,282 - DVU0218 0.22 +1.6 258,282 - DVU0218 0.22 +0.1 258,282 - DVU0218 0.22 -0.2 258,694 + DVU0218 0.61 +0.5 258,757 - DVU0218 0.67 -0.2 258,757 - DVU0218 0.67 -0.3 259,106 + -2.2 259,106 + -0.7 259,106 + +1.2 259,133 - -0.4 259,133 - +0.7 259,133 - +2.2 259,133 - -1.1 259,148 - +1.1 259,170 + -0.6 259,259 + DVU0219 0.22 +0.1 259,259 + DVU0219 0.22 -0.4 259,259 + DVU0219 0.22 -0.6 259,267 - DVU0219 0.23 -0.9 259,398 + DVU0219 0.44 -1.5 259,845 - DVU0220 0.10 -0.8 259,845 - DVU0220 0.10 +0.3 260,035 - DVU0220 0.29 -0.6 260,088 - DVU0220 0.34 -0.4 260,152 - DVU0220 0.41 +0.4 260,189 - DVU0220 0.44 +0.5 260,234 + DVU0220 0.49 +0.1 260,234 + DVU0220 0.49 -0.5 260,237 - DVU0220 0.49 -0.2 260,242 - DVU0220 0.49 +0.2 260,270 + DVU0220 0.52 -0.7 260,360 - DVU0220 0.61 +0.1 260,360 - DVU0220 0.61 -1.4 260,374 - DVU0220 0.62 -0.3 260,440 - DVU0220 0.69 -0.0 260,445 - DVU0220 0.69 +0.3 260,563 + DVU0220 0.81 +0.5 260,584 + DVU0220 0.83 -0.4 260,592 - DVU0220 0.84 +1.0 260,620 + DVU0220 0.87 -0.0 260,662 - -0.5 260,677 - -2.5 260,730 - -0.2
Or see this region's nucleotide sequence