Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0112

Experiment: Formate/Acetate-Sulfate (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-60 mM)
144,101	-				-1.3
144,183	+				-0.0
144,255	+				-0.2
144,263	+				-0.1
144,263	+				-0.1
144,271	-				+0.1
144,273	-				-0.1
144,287	+				-0.9
144,287	+				-0.2
144,300	-				-0.2
144,386	+		DVU0111	0.19	-0.3
144,497	+		DVU0111	0.32	-0.3
144,585	-		DVU0111	0.43	-0.5
144,713	+		DVU0111	0.59	-0.4
144,723	+		DVU0111	0.60	+0.1
144,730	-		DVU0111	0.61	+0.1
144,765	+		DVU0111	0.66	-0.1
144,822	+		DVU0111	0.73	-1.4
144,829	-		DVU0111	0.73	-0.2
144,845	-		DVU0111	0.75	-1.2
144,850	+		DVU0111	0.76	-0.6
144,872	+		DVU0111	0.79	-0.2
144,880	-		DVU0111	0.80	-0.0
144,887	-		DVU0111	0.81	-0.3
144,939	-		DVU0111	0.87	+0.8
144,955	+		DVU0111	0.89	-0.3
144,988	+				-1.8
144,995	-				+0.4
145,027	+				-0.1
145,074	-				+0.6
145,105	+				-0.1
145,105	+				+0.4
145,118	-				-1.1
145,163	+				+0.0
145,173	+				-0.2
145,181	-				-1.0
145,203	+	phrB	DVU0112	0.11	+0.4
145,268	+	phrB	DVU0112	0.15	-0.2
145,270	+	phrB	DVU0112	0.15	-0.3
145,380	+	phrB	DVU0112	0.23	+0.2
145,407	+	phrB	DVU0112	0.25	+0.2
145,441	+	phrB	DVU0112	0.27	+1.6
145,449	-	phrB	DVU0112	0.28	+0.1
145,478	+	phrB	DVU0112	0.30	-0.4
145,533	+	phrB	DVU0112	0.34	-0.3
145,544	-	phrB	DVU0112	0.35	+0.4
145,554	-	phrB	DVU0112	0.35	-0.2
145,573	-	phrB	DVU0112	0.37	+0.2
145,660	-	phrB	DVU0112	0.43	-1.1
145,748	+	phrB	DVU0112	0.49	+2.2
145,862	-	phrB	DVU0112	0.57	-0.4
145,873	+	phrB	DVU0112	0.58	+1.4
145,888	-	phrB	DVU0112	0.59	+0.0
145,982	-	phrB	DVU0112	0.65	-0.1
145,993	+	phrB	DVU0112	0.66	+0.1
146,044	-	phrB	DVU0112	0.70	-0.1
146,056	+	phrB	DVU0112	0.71	+1.2
146,058	-	phrB	DVU0112	0.71	+0.3
146,147	-	phrB	DVU0112	0.77	+0.6
146,156	+	phrB	DVU0112	0.78	+0.0
146,172	-	phrB	DVU0112	0.79	-0.1
146,308	+	phrB	DVU0112	0.88	-0.3
146,314	-	phrB	DVU0112	0.89	-0.1
146,316	-	phrB	DVU0112	0.89	-0.0
146,316	-	phrB	DVU0112	0.89	+0.3
146,338	+				-0.4
146,346	-				+1.7
146,362	+				-0.7
146,362	+				+0.1
146,364	+				-0.1
146,372	-				+0.2
146,387	-				-0.2
146,506	+				+0.7
146,542	-				+1.7
146,547	-				+1.2
146,563	-				-0.4
146,575	-				-0.7
146,612	+				-0.5
146,627	+				-0.6
146,627	+				+0.2
146,652	+				-0.4
146,660	-				-0.3
146,704	-				-0.1
146,704	-				-0.9
146,708	+				-0.4
146,739	-				-0.6
146,796	-				+0.1
146,881	-				+0.3
146,882	+				+0.1
146,883	+				+1.0
146,912	+				+0.1
146,912	+				+0.2
146,912	+				+0.6
146,920	-				+0.3
146,939	+				+0.3
146,939	+				+1.2
146,947	-				-0.9
146,948	+				-0.1
146,956	-				+0.1
146,971	+				-0.7
146,971	+				+1.5
147,098	-				+0.2
147,215	-	hisI	DVU0113	0.26	-1.3
147,298	-	hisI	DVU0113	0.48	-1.5
147,304	+	hisI	DVU0113	0.49	+1.0
147,468	-				-0.5