Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2239

Experiment: Formate/Acetate-Sulfate (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-60 mM)
2,329,958	-	cbiB	DVU2237	0.73	-2.0
2,330,087	-	cbiB	DVU2237	0.86	+0.2
2,330,309	-		DVU2238	0.20	-0.7
2,330,324	-		DVU2238	0.23	+0.1
2,330,351	+		DVU2238	0.28	-0.2
2,330,391	-		DVU2238	0.37	+0.3
2,330,428	+		DVU2238	0.44	-0.3
2,330,476	+		DVU2238	0.54	-0.3
2,330,484	-		DVU2238	0.56	-0.1
2,330,635	-		DVU2238	0.88	-0.3
2,330,732	+				-0.5
2,330,824	+				-0.4
2,330,824	+				+0.0
2,330,842	-				-0.4
2,330,868	-				-0.1
2,331,041	-				-0.3
2,331,131	+		DVU2239	0.13	+1.9
2,331,227	-		DVU2239	0.20	+0.7
2,331,253	-		DVU2239	0.22	+0.1
2,331,401	-		DVU2239	0.32	-0.1
2,331,451	-		DVU2239	0.36	-0.7
2,331,465	+		DVU2239	0.37	+0.1
2,331,465	+		DVU2239	0.37	+1.7
2,331,471	-		DVU2239	0.37	+0.9
2,331,499	+		DVU2239	0.39	-0.2
2,331,520	+		DVU2239	0.40	+0.3
2,331,531	+		DVU2239	0.41	+0.5
2,331,565	-		DVU2239	0.43	+0.1
2,331,575	+		DVU2239	0.44	+0.3
2,331,575	+		DVU2239	0.44	-0.4
2,331,658	+		DVU2239	0.50	+0.4
2,331,689	+		DVU2239	0.52	-0.1
2,331,747	+		DVU2239	0.56	-0.5
2,331,755	-		DVU2239	0.57	-0.2
2,331,788	-		DVU2239	0.59	+1.6
2,331,788	-		DVU2239	0.59	-0.5
2,331,906	-		DVU2239	0.67	-0.1
2,331,999	-		DVU2239	0.73	+0.2
2,332,044	+		DVU2239	0.77	-0.2
2,332,076	+		DVU2239	0.79	+1.2
2,332,137	+		DVU2239	0.83	+0.6
2,332,216	+		DVU2239	0.88	-0.4
2,332,249	-				+0.1
2,332,484	+				-1.1
2,332,492	-				-0.8
2,332,600	+		DVU2240	0.13	-1.1
2,332,683	-		DVU2240	0.18	+0.2
2,332,782	+		DVU2240	0.24	-0.6
2,332,797	+		DVU2240	0.25	-1.1
2,332,832	+		DVU2240	0.27	-0.4
2,332,832	+		DVU2240	0.27	-0.3
2,332,840	-		DVU2240	0.28	-1.0
2,333,010	+		DVU2240	0.38	-1.4
2,333,018	-		DVU2240	0.38	-0.7
2,333,104	+		DVU2240	0.44	-0.9
2,333,182	+		DVU2240	0.48	-1.2
2,333,298	-		DVU2240	0.55	-0.9
2,333,308	-		DVU2240	0.56	-0.7
2,333,361	+		DVU2240	0.59	-0.8