Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2091

Experiment: Formate/Acetate-Sulfate (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-60 mM)
2,179,566	-				-0.2
2,179,586	+				-0.1
2,179,630	-				-0.1
2,179,635	-				+0.9
2,180,033	+		DVU2090	0.56	+0.9
2,180,068	+		DVU2090	0.60	-0.3
2,180,176	-		DVU2090	0.73	-0.7
2,180,198	+		DVU2090	0.75	-0.1
2,180,206	-		DVU2090	0.76	+0.1
2,180,227	+		DVU2090	0.79	-0.1
2,180,227	+		DVU2090	0.79	+0.1
2,180,263	+		DVU2090	0.83	-1.0
2,180,366	+				-0.6
2,180,440	-				+1.3
2,180,452	+				-0.0
2,180,467	+				+0.0
2,180,540	+				-0.1
2,180,600	+				-0.8
2,180,610	+	thiE-1	DVU2091	0.10	-1.1
2,180,687	+	thiE-1	DVU2091	0.22	+0.1
2,180,849	+	thiE-1	DVU2091	0.46	-0.8
2,180,857	-	thiE-1	DVU2091	0.47	-1.6
2,180,859	+	thiE-1	DVU2091	0.47	-0.7
2,180,919	+	thiE-1	DVU2091	0.56	-1.1
2,181,090	+	thiE-1	DVU2091	0.81	-1.3
2,181,093	-	thiE-1	DVU2091	0.81	-0.1
2,181,093	-	thiE-1	DVU2091	0.81	-2.5
2,181,108	-	thiE-1	DVU2091	0.84	-1.9
2,181,192	+				-0.7
2,181,236	-				-0.0
2,181,406	+				-1.1
2,181,432	-				+0.7
2,181,583	+	moeB	DVU2092	0.15	-1.3
2,181,647	-	moeB	DVU2092	0.25	-0.8
2,181,762	+	moeB	DVU2092	0.43	-0.1
2,181,762	+	moeB	DVU2092	0.43	-1.0
2,181,875	-	moeB	DVU2092	0.60	-1.1
2,181,934	-	moeB	DVU2092	0.69	-0.8
2,182,010	-	moeB	DVU2092	0.81	+0.5
2,182,083	-				-1.1
2,182,139	-				-0.1
2,182,204	-				-0.5
2,182,219	-				-1.1