Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1714

Experiment: Formate/Acetate-Sulfate (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-60 mM)
1,788,027	-		DVU1712	0.80	-1.0
1,788,074	+		DVU1712	0.83	-0.3
1,788,160	+		DVU1712	0.88	-0.7
1,788,265	-				-0.4
1,788,300	-				-0.6
1,788,397	-		DVU1713	0.13	-0.2
1,788,412	-		DVU1713	0.15	+0.3
1,788,498	-		DVU1713	0.28	+1.2
1,788,505	-		DVU1713	0.30	+0.5
1,788,595	-		DVU1713	0.44	-0.5
1,788,647	+		DVU1713	0.52	-0.2
1,788,647	+		DVU1713	0.52	-0.0
1,788,647	+		DVU1713	0.52	-0.1
1,788,667	+		DVU1713	0.55	-0.1
1,788,671	+		DVU1713	0.56	-1.2
1,788,677	+		DVU1713	0.57	+1.0
1,788,677	+		DVU1713	0.57	+0.0
1,788,677	+		DVU1713	0.57	-1.0
1,788,677	+		DVU1713	0.57	+0.5
1,788,680	-		DVU1713	0.57	+1.1
1,788,685	-		DVU1713	0.58	-1.0
1,788,713	+		DVU1713	0.62	+0.2
1,788,721	-		DVU1713	0.64	-0.5
1,788,776	-		DVU1713	0.72	-0.8
1,788,776	-		DVU1713	0.72	+1.2
1,788,788	+		DVU1713	0.74	+0.2
1,788,805	+		DVU1713	0.77	-0.1
1,788,825	+		DVU1713	0.80	+0.2
1,788,887	-		DVU1713	0.90	+1.1
1,788,998	-				-1.3
1,789,032	+				-0.1
1,789,045	+				+0.2
1,789,053	-				-0.0
1,789,053	-				-0.2
1,789,053	-				-0.3
1,789,053	-				-0.1
1,789,159	-				-0.1
1,789,159	-				-0.2
1,789,172	+		DVU1714	0.10	+0.4
1,789,175	-		DVU1714	0.10	+1.6
1,789,187	+		DVU1714	0.11	+0.2
1,789,201	-		DVU1714	0.11	+0.4
1,789,260	-		DVU1714	0.14	+0.2
1,789,284	-		DVU1714	0.15	+0.1
1,789,378	-		DVU1714	0.20	+0.0
1,789,749	+		DVU1714	0.38	+0.3
1,789,768	+		DVU1714	0.39	+0.1
1,789,778	-		DVU1714	0.39	+0.3
1,789,790	+		DVU1714	0.40	+0.1
1,789,798	-		DVU1714	0.40	+0.3
1,789,814	-		DVU1714	0.41	+0.0
1,789,884	-		DVU1714	0.44	+0.1
1,789,978	+		DVU1714	0.49	-0.2
1,790,159	-		DVU1714	0.57	+0.3
1,790,225	-		DVU1714	0.60	-1.4
1,790,348	+		DVU1714	0.66	+0.6
1,790,389	-		DVU1714	0.68	+0.0
1,790,412	-		DVU1714	0.69	-0.1
1,790,449	+		DVU1714	0.71	-0.1
1,790,545	-		DVU1714	0.76	+0.1
1,790,727	-		DVU1714	0.84	-0.4
1,790,738	+		DVU1714	0.85	+0.2
1,790,805	+		DVU1714	0.88	-0.2
1,790,871	+				+0.0
1,790,898	+				-0.0
1,790,901	-				+0.1
1,790,906	-				+0.3
1,791,001	+				-0.6
1,791,038	+				-0.4
1,791,038	+				+0.7
1,791,046	-				+0.4
1,791,046	-				-0.4
1,791,046	-				-0.1
1,791,167	-				+0.0
1,791,232	-				-0.1
1,791,273	-				-0.1
1,791,292	-		DVU1715	0.11	-0.1
1,791,297	+		DVU1715	0.12	+0.4
1,791,390	-		DVU1715	0.28	-0.6
1,791,432	-		DVU1715	0.35	-0.0
1,791,521	+		DVU1715	0.50	-0.2
1,791,550	-		DVU1715	0.55	+0.5
1,791,550	-		DVU1715	0.55	-0.3
1,791,597	-		DVU1715	0.63	-0.5
1,791,632	-		DVU1715	0.69	+0.1
1,791,711	+		DVU1715	0.82	-0.2
1,791,756	+				-0.1
1,791,847	-				-0.1
1,791,847	-				+0.1
1,791,905	-		DVU1716	0.14	+0.5
1,791,919	+		DVU1716	0.18	+0.1
1,791,927	-		DVU1716	0.21	-0.1
1,791,927	-		DVU1716	0.21	+0.1
1,791,942	-		DVU1716	0.25	-0.1
1,792,009	+		DVU1716	0.44	-0.4