Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0703
Experiment: Formate/Acetate-Sulfate (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/30-60 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 781,193 | + | -0.3 | |||
| 781,230 | + | -0.5 | |||
| 781,238 | - | +0.6 | |||
| 781,330 | + | -0.1 | |||
| 781,389 | - | -0.4 | |||
| 781,391 | + | -0.3 | |||
| 781,399 | - | +1.7 | |||
| 781,463 | + | -0.1 | |||
| 781,677 | + | DVU0702 | 0.25 | +0.4 | |
| 781,737 | - | DVU0702 | 0.38 | -0.1 | |
| 781,737 | - | DVU0702 | 0.38 | +0.3 | |
| 781,867 | + | DVU0702 | 0.67 | +0.4 | |
| 781,916 | + | DVU0702 | 0.78 | -0.5 | |
| 781,934 | + | DVU0702 | 0.82 | +0.2 | |
| 781,944 | - | DVU0702 | 0.85 | -0.8 | |
| 781,953 | + | DVU0702 | 0.87 | +0.1 | |
| 781,994 | - | +0.4 | |||
| 782,006 | + | -0.8 | |||
| 782,363 | + | -0.4 | |||
| 782,608 | + | lepA | DVU0703 | 0.23 | +1.1 |
| 782,768 | + | lepA | DVU0703 | 0.32 | -0.1 |
| 782,880 | + | lepA | DVU0703 | 0.38 | -1.1 |
| 783,058 | + | lepA | DVU0703 | 0.48 | -0.6 |
| 783,133 | - | lepA | DVU0703 | 0.52 | -0.3 |
| 783,616 | - | lepA | DVU0703 | 0.79 | +0.3 |
| 783,941 | + | -0.5 | |||
| 784,800 | - | +1.1 | |||
| 784,945 | + | +0.6 | |||
| 784,945 | + | -0.8 | |||
| 784,945 | + | -0.4 | |||
| 784,975 | + | +0.3 | |||
| 784,983 | - | -0.2 | |||
| 784,983 | - | +0.8 |
Or see this region's nucleotide sequence