Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DORF41147
Experiment: Formate/Acetate-Sulfate (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/30-60 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 2,455,403 | + | DVU2357 | 0.36 | -2.4 | |
| 2,455,403 | + | DVU2357 | 0.36 | -0.9 | |
| 2,455,534 | + | DVU2357 | 0.48 | -1.1 | |
| 2,455,570 | + | DVU2357 | 0.51 | -1.0 | |
| 2,455,637 | + | DVU2357 | 0.57 | -0.3 | |
| 2,455,667 | - | DVU2357 | 0.60 | +0.8 | |
| 2,455,682 | + | DVU2357 | 0.61 | -0.5 | |
| 2,455,922 | - | DVU2357 | 0.83 | +0.4 | |
| 2,456,065 | + | -0.8 | |||
| 2,456,073 | - | -0.7 | |||
| 2,456,103 | + | -1.3 | |||
| 2,456,111 | - | -0.3 | |||
| 2,456,128 | - | +0.2 | |||
| 2,456,258 | + | DORF41147 | 0.84 | -0.6 | |
| 2,456,266 | - | -0.7 | |||
| 2,456,324 | + | -0.5 | |||
| 2,456,324 | + | -0.4 | |||
| 2,456,353 | - | -0.2 | |||
| 2,456,380 | - | -0.0 | |||
| 2,456,411 | - | +0.3 | |||
| 2,456,736 | + | +0.7 | |||
| 2,456,741 | - | -1.4 | |||
| 2,456,744 | - | -0.2 | |||
| 2,456,746 | + | +0.2 | |||
| 2,456,754 | - | +1.7 | |||
| 2,456,798 | - | +0.8 | |||
| 2,456,806 | + | -0.0 | |||
| 2,456,814 | - | -0.6 | |||
| 2,456,877 | + | DVU2359 | 0.13 | +0.2 | |
| 2,456,951 | + | DVU2359 | 0.18 | -0.5 | |
| 2,456,998 | + | DVU2359 | 0.21 | +0.2 | |
| 2,457,095 | - | DVU2359 | 0.27 | +0.0 | |
| 2,457,179 | - | DVU2359 | 0.32 | +0.0 |
Or see this region's nucleotide sequence