Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5854

Experiment: L-Leucine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_5853 and Pf6N2E2_5854 are separated by 11 nucleotidesPf6N2E2_5854 and Pf6N2E2_5855 are separated by 262 nucleotides Pf6N2E2_5853 - Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1), at 6,669,012 to 6,670,784 _5853 Pf6N2E2_5854 - Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1), at 6,670,796 to 6,671,500 _5854 Pf6N2E2_5855 - 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2), at 6,671,763 to 6,674,594 _5855 Position (kb) 6670 6671 6672Strain fitness (log2 ratio) -2 -1 0 1at 6671.529 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (C)
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6,671,529 + -2.6

Or see this region's nucleotide sequence