Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5849 and Pf6N2E2_5850 are separated by 288 nucleotides Pf6N2E2_5850 and Pf6N2E2_5851 are separated by 482 nucleotides Pf6N2E2_5851 and Pf6N2E2_5852 overlap by 7 nucleotides
Pf6N2E2_5849 - large component of pyruvate transporter (actP-like) (from data) , at 6,664,670 to 6,666,328
_5849
Pf6N2E2_5850 - Citrate synthase (si) (EC 2.3.3.1), at 6,666,617 to 6,667,906
_5850
Pf6N2E2_5851 - Succinate dehydrogenase cytochrome b-556 subunit, at 6,668,389 to 6,668,646
_5851
Pf6N2E2_5852 - Succinate dehydrogenase hydrophobic membrane anchor protein, at 6,668,640 to 6,669,008
_5852
Position (kb)
6666
6667
6668 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6665.837 kb on + strand, within Pf6N2E2_5849 at 6665.838 kb on - strand, within Pf6N2E2_5849 at 6666.032 kb on + strand, within Pf6N2E2_5849 at 6666.032 kb on + strand, within Pf6N2E2_5849 at 6666.362 kb on + strand at 6666.404 kb on - strand at 6666.527 kb on + strand at 6666.527 kb on + strand at 6666.528 kb on - strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.561 kb on + strand at 6666.562 kb on - strand at 6666.562 kb on - strand at 6666.562 kb on - strand at 6666.562 kb on - strand at 6666.562 kb on - strand at 6666.562 kb on - strand at 6666.563 kb on + strand at 6666.563 kb on + strand at 6666.563 kb on + strand at 6666.563 kb on + strand at 6666.563 kb on + strand at 6666.564 kb on - strand at 6666.564 kb on - strand at 6666.564 kb on - strand at 6666.564 kb on - strand at 6666.564 kb on - strand at 6666.564 kb on - strand at 6666.564 kb on - strand at 6666.564 kb on - strand at 6666.564 kb on - strand at 6666.565 kb on + strand at 6666.565 kb on + strand at 6666.565 kb on + strand at 6666.565 kb on + strand at 6666.565 kb on + strand at 6666.566 kb on - strand at 6666.566 kb on - strand at 6666.566 kb on - strand at 6666.566 kb on - strand at 6666.566 kb on - strand at 6666.566 kb on - strand at 6666.587 kb on + strand at 6666.588 kb on - strand at 6666.618 kb on + strand at 6666.618 kb on + strand at 6666.618 kb on + strand at 6666.618 kb on + strand at 6666.619 kb on - strand at 6667.917 kb on - strand at 6667.920 kb on - strand at 6667.920 kb on - strand at 6667.920 kb on - strand at 6667.968 kb on - strand at 6668.086 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 6,665,837 + Pf6N2E2_5849 0.70 +0.2 6,665,838 - Pf6N2E2_5849 0.70 -1.1 6,666,032 + Pf6N2E2_5849 0.82 -1.6 6,666,032 + Pf6N2E2_5849 0.82 +0.2 6,666,362 + -1.4 6,666,404 - -0.1 6,666,527 + -1.1 6,666,527 + -0.5 6,666,528 - -0.4 6,666,561 + -2.0 6,666,561 + -0.9 6,666,561 + +0.1 6,666,561 + +0.5 6,666,561 + -0.6 6,666,561 + +0.2 6,666,561 + -0.9 6,666,561 + +2.7 6,666,561 + +0.4 6,666,561 + -0.3 6,666,561 + -0.8 6,666,562 - -0.5 6,666,562 - -0.5 6,666,562 - -0.6 6,666,562 - -1.6 6,666,562 - +0.3 6,666,562 - +0.1 6,666,563 + -0.1 6,666,563 + +1.1 6,666,563 + -0.3 6,666,563 + +0.6 6,666,563 + +0.9 6,666,564 - -0.0 6,666,564 - -0.8 6,666,564 - -0.5 6,666,564 - -2.2 6,666,564 - -0.8 6,666,564 - -1.1 6,666,564 - -1.3 6,666,564 - -0.2 6,666,564 - -0.2 6,666,565 + -1.4 6,666,565 + -0.5 6,666,565 + -0.7 6,666,565 + +0.9 6,666,565 + -0.7 6,666,566 - -0.5 6,666,566 - +0.1 6,666,566 - -0.3 6,666,566 - -0.7 6,666,566 - +0.3 6,666,566 - -1.5 6,666,587 + +0.1 6,666,588 - +1.1 6,666,618 + -1.0 6,666,618 + -0.0 6,666,618 + -1.8 6,666,618 + -0.3 6,666,619 - -0.3 6,667,917 - -2.6 6,667,920 - -0.9 6,667,920 - -0.8 6,667,920 - -3.3 6,667,968 - -1.5 6,668,086 + -0.0
Or see this region's nucleotide sequence