Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4975 and Pf6N2E2_4976 are separated by 107 nucleotides Pf6N2E2_4976 and Pf6N2E2_4977 are separated by 11 nucleotides
Pf6N2E2_4975 - Histone acetyltransferase HPA2 and related acetyltransferases, at 5,740,398 to 5,740,859
_4975
Pf6N2E2_4976 - Ethanolamine ammonia-lyase light chain (EC 4.3.1.7), at 5,740,967 to 5,741,791
_4976
Pf6N2E2_4977 - Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7), at 5,741,803 to 5,743,197
_4977
Position (kb)
5740
5741
5742 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5739.975 kb on + strand at 5739.975 kb on + strand at 5739.976 kb on - strand at 5740.083 kb on + strand at 5740.083 kb on + strand at 5740.084 kb on - strand at 5740.150 kb on - strand at 5740.150 kb on - strand at 5740.288 kb on + strand at 5740.426 kb on + strand at 5740.426 kb on + strand at 5740.426 kb on + strand at 5740.426 kb on + strand at 5740.427 kb on - strand at 5740.427 kb on - strand at 5740.427 kb on - strand at 5740.427 kb on - strand at 5740.427 kb on - strand at 5740.468 kb on + strand, within Pf6N2E2_4975 at 5740.603 kb on + strand, within Pf6N2E2_4975 at 5740.603 kb on + strand, within Pf6N2E2_4975 at 5740.603 kb on + strand, within Pf6N2E2_4975 at 5740.603 kb on + strand, within Pf6N2E2_4975 at 5740.604 kb on - strand, within Pf6N2E2_4975 at 5740.604 kb on - strand, within Pf6N2E2_4975 at 5740.604 kb on - strand, within Pf6N2E2_4975 at 5740.604 kb on - strand, within Pf6N2E2_4975 at 5740.604 kb on - strand, within Pf6N2E2_4975 at 5740.711 kb on + strand, within Pf6N2E2_4975 at 5740.711 kb on + strand, within Pf6N2E2_4975 at 5740.712 kb on - strand, within Pf6N2E2_4975 at 5740.712 kb on - strand, within Pf6N2E2_4975 at 5740.712 kb on - strand, within Pf6N2E2_4975 at 5740.712 kb on - strand, within Pf6N2E2_4975 at 5740.787 kb on - strand, within Pf6N2E2_4975 at 5740.862 kb on + strand at 5740.862 kb on + strand at 5740.862 kb on + strand at 5740.863 kb on - strand at 5740.863 kb on - strand at 5740.863 kb on - strand at 5740.863 kb on - strand at 5740.863 kb on - strand at 5740.890 kb on - strand at 5740.890 kb on - strand at 5740.988 kb on + strand at 5740.989 kb on - strand at 5740.989 kb on - strand at 5741.006 kb on - strand at 5741.014 kb on + strand at 5741.027 kb on + strand at 5741.027 kb on + strand at 5741.028 kb on - strand at 5741.028 kb on - strand at 5741.100 kb on + strand, within Pf6N2E2_4976 at 5741.100 kb on + strand, within Pf6N2E2_4976 at 5741.101 kb on - strand, within Pf6N2E2_4976 at 5741.208 kb on + strand, within Pf6N2E2_4976 at 5741.209 kb on - strand, within Pf6N2E2_4976 at 5741.209 kb on - strand, within Pf6N2E2_4976 at 5741.398 kb on + strand, within Pf6N2E2_4976 at 5741.398 kb on + strand, within Pf6N2E2_4976 at 5741.398 kb on + strand, within Pf6N2E2_4976 at 5741.399 kb on - strand, within Pf6N2E2_4976 at 5741.399 kb on - strand, within Pf6N2E2_4976 at 5741.399 kb on - strand, within Pf6N2E2_4976 at 5741.399 kb on - strand, within Pf6N2E2_4976 at 5741.399 kb on - strand, within Pf6N2E2_4976 at 5741.479 kb on - strand, within Pf6N2E2_4976 at 5741.537 kb on + strand, within Pf6N2E2_4976 at 5741.537 kb on + strand, within Pf6N2E2_4976 at 5741.538 kb on - strand, within Pf6N2E2_4976 at 5741.538 kb on - strand, within Pf6N2E2_4976 at 5741.541 kb on + strand, within Pf6N2E2_4976 at 5741.541 kb on + strand, within Pf6N2E2_4976 at 5741.541 kb on + strand, within Pf6N2E2_4976 at 5741.542 kb on - strand, within Pf6N2E2_4976 at 5741.542 kb on - strand, within Pf6N2E2_4976 at 5741.542 kb on - strand, within Pf6N2E2_4976 at 5741.542 kb on - strand, within Pf6N2E2_4976 at 5741.542 kb on - strand, within Pf6N2E2_4976 at 5741.542 kb on - strand, within Pf6N2E2_4976 at 5741.542 kb on - strand, within Pf6N2E2_4976 at 5741.804 kb on + strand at 5741.804 kb on + strand at 5741.804 kb on + strand at 5741.805 kb on - strand at 5741.805 kb on - strand at 5741.805 kb on - strand at 5741.951 kb on + strand, within Pf6N2E2_4977 at 5741.981 kb on + strand, within Pf6N2E2_4977 at 5741.982 kb on - strand, within Pf6N2E2_4977 at 5741.982 kb on - strand, within Pf6N2E2_4977 at 5742.098 kb on + strand, within Pf6N2E2_4977 at 5742.098 kb on + strand, within Pf6N2E2_4977 at 5742.099 kb on - strand, within Pf6N2E2_4977 at 5742.185 kb on + strand, within Pf6N2E2_4977 at 5742.185 kb on + strand, within Pf6N2E2_4977 at 5742.185 kb on + strand, within Pf6N2E2_4977 at 5742.185 kb on + strand, within Pf6N2E2_4977 at 5742.185 kb on + strand, within Pf6N2E2_4977 at 5742.186 kb on - strand, within Pf6N2E2_4977 at 5742.186 kb on - strand, within Pf6N2E2_4977 at 5742.186 kb on - strand, within Pf6N2E2_4977 at 5742.211 kb on + strand, within Pf6N2E2_4977 at 5742.212 kb on - strand, within Pf6N2E2_4977 at 5742.212 kb on - strand, within Pf6N2E2_4977 at 5742.257 kb on + strand, within Pf6N2E2_4977 at 5742.338 kb on + strand, within Pf6N2E2_4977 at 5742.338 kb on + strand, within Pf6N2E2_4977 at 5742.338 kb on + strand, within Pf6N2E2_4977 at 5742.338 kb on + strand, within Pf6N2E2_4977 at 5742.339 kb on - strand, within Pf6N2E2_4977 at 5742.339 kb on - strand, within Pf6N2E2_4977 at 5742.339 kb on - strand, within Pf6N2E2_4977 at 5742.339 kb on - strand, within Pf6N2E2_4977 at 5742.339 kb on - strand, within Pf6N2E2_4977
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 5,739,975 + -0.3 5,739,975 + +0.3 5,739,976 - -1.2 5,740,083 + +0.6 5,740,083 + -0.5 5,740,084 - -0.7 5,740,150 - +0.8 5,740,150 - -0.9 5,740,288 + -0.5 5,740,426 + +0.5 5,740,426 + +0.1 5,740,426 + -2.4 5,740,426 + +0.3 5,740,427 - -1.2 5,740,427 - +0.1 5,740,427 - +0.2 5,740,427 - -1.2 5,740,427 - +0.1 5,740,468 + Pf6N2E2_4975 0.15 -0.6 5,740,603 + Pf6N2E2_4975 0.44 -0.3 5,740,603 + Pf6N2E2_4975 0.44 +1.1 5,740,603 + Pf6N2E2_4975 0.44 +1.2 5,740,603 + Pf6N2E2_4975 0.44 +0.8 5,740,604 - Pf6N2E2_4975 0.45 +0.6 5,740,604 - Pf6N2E2_4975 0.45 +0.2 5,740,604 - Pf6N2E2_4975 0.45 +0.0 5,740,604 - Pf6N2E2_4975 0.45 +0.2 5,740,604 - Pf6N2E2_4975 0.45 +0.1 5,740,711 + Pf6N2E2_4975 0.68 -0.3 5,740,711 + Pf6N2E2_4975 0.68 -1.4 5,740,712 - Pf6N2E2_4975 0.68 +1.7 5,740,712 - Pf6N2E2_4975 0.68 +0.7 5,740,712 - Pf6N2E2_4975 0.68 +0.7 5,740,712 - Pf6N2E2_4975 0.68 -0.4 5,740,787 - Pf6N2E2_4975 0.84 -1.1 5,740,862 + +0.8 5,740,862 + +0.1 5,740,862 + -1.7 5,740,863 - -1.7 5,740,863 - +0.5 5,740,863 - +0.7 5,740,863 - -1.5 5,740,863 - -0.2 5,740,890 - -0.4 5,740,890 - +0.5 5,740,988 + +0.5 5,740,989 - +0.2 5,740,989 - -0.9 5,741,006 - +0.8 5,741,014 + +1.3 5,741,027 + +0.4 5,741,027 + -0.6 5,741,028 - -0.4 5,741,028 - -0.1 5,741,100 + Pf6N2E2_4976 0.16 -0.5 5,741,100 + Pf6N2E2_4976 0.16 +0.2 5,741,101 - Pf6N2E2_4976 0.16 +0.1 5,741,208 + Pf6N2E2_4976 0.29 -0.5 5,741,209 - Pf6N2E2_4976 0.29 +0.6 5,741,209 - Pf6N2E2_4976 0.29 +1.3 5,741,398 + Pf6N2E2_4976 0.52 +0.7 5,741,398 + Pf6N2E2_4976 0.52 -0.1 5,741,398 + Pf6N2E2_4976 0.52 -0.2 5,741,399 - Pf6N2E2_4976 0.52 +1.0 5,741,399 - Pf6N2E2_4976 0.52 -0.4 5,741,399 - Pf6N2E2_4976 0.52 +0.1 5,741,399 - Pf6N2E2_4976 0.52 +0.2 5,741,399 - Pf6N2E2_4976 0.52 -0.9 5,741,479 - Pf6N2E2_4976 0.62 +1.0 5,741,537 + Pf6N2E2_4976 0.69 -0.7 5,741,537 + Pf6N2E2_4976 0.69 -0.9 5,741,538 - Pf6N2E2_4976 0.69 +0.6 5,741,538 - Pf6N2E2_4976 0.69 -0.3 5,741,541 + Pf6N2E2_4976 0.70 +0.6 5,741,541 + Pf6N2E2_4976 0.70 -0.2 5,741,541 + Pf6N2E2_4976 0.70 -0.0 5,741,542 - Pf6N2E2_4976 0.70 -0.0 5,741,542 - Pf6N2E2_4976 0.70 -0.5 5,741,542 - Pf6N2E2_4976 0.70 -0.1 5,741,542 - Pf6N2E2_4976 0.70 +0.2 5,741,542 - Pf6N2E2_4976 0.70 +0.5 5,741,542 - Pf6N2E2_4976 0.70 -0.2 5,741,542 - Pf6N2E2_4976 0.70 +0.1 5,741,804 + -0.8 5,741,804 + +0.8 5,741,804 + -0.6 5,741,805 - +0.4 5,741,805 - +0.8 5,741,805 - -1.3 5,741,951 + Pf6N2E2_4977 0.11 +1.0 5,741,981 + Pf6N2E2_4977 0.13 +1.8 5,741,982 - Pf6N2E2_4977 0.13 +0.5 5,741,982 - Pf6N2E2_4977 0.13 -0.3 5,742,098 + Pf6N2E2_4977 0.21 +0.7 5,742,098 + Pf6N2E2_4977 0.21 +0.6 5,742,099 - Pf6N2E2_4977 0.21 -3.0 5,742,185 + Pf6N2E2_4977 0.27 +0.2 5,742,185 + Pf6N2E2_4977 0.27 -0.6 5,742,185 + Pf6N2E2_4977 0.27 -0.9 5,742,185 + Pf6N2E2_4977 0.27 +0.2 5,742,185 + Pf6N2E2_4977 0.27 +0.7 5,742,186 - Pf6N2E2_4977 0.27 +0.5 5,742,186 - Pf6N2E2_4977 0.27 -0.3 5,742,186 - Pf6N2E2_4977 0.27 +0.2 5,742,211 + Pf6N2E2_4977 0.29 -0.1 5,742,212 - Pf6N2E2_4977 0.29 +0.3 5,742,212 - Pf6N2E2_4977 0.29 +0.5 5,742,257 + Pf6N2E2_4977 0.33 +0.5 5,742,338 + Pf6N2E2_4977 0.38 +0.3 5,742,338 + Pf6N2E2_4977 0.38 -0.1 5,742,338 + Pf6N2E2_4977 0.38 -0.8 5,742,338 + Pf6N2E2_4977 0.38 -0.3 5,742,339 - Pf6N2E2_4977 0.38 -0.6 5,742,339 - Pf6N2E2_4977 0.38 +0.6 5,742,339 - Pf6N2E2_4977 0.38 -1.0 5,742,339 - Pf6N2E2_4977 0.38 -0.6 5,742,339 - Pf6N2E2_4977 0.38 +1.5
Or see this region's nucleotide sequence