Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3355 and Pf6N2E2_6118 are separated by 143 nucleotides Pf6N2E2_6118 and Pf6N2E2_6119 are separated by 100 nucleotides Pf6N2E2_6119 and Pf6N2E2_3356 are separated by 409 nucleotides Pf6N2E2_3356 and Pf6N2E2_3357 are separated by 78 nucleotides
Pf6N2E2_3355 - FIG000325: clustered with transcription termination protein NusA, at 3,885,341 to 3,885,799
_3355
Pf6N2E2_6118 - tRNA-Met-CAT, at 3,885,943 to 3,886,016
_6118
Pf6N2E2_6119 - tRNA-Leu-GAG, at 3,886,117 to 3,886,199
_6119
Pf6N2E2_3356 - Triosephosphate isomerase (EC 5.3.1.1), at 3,886,609 to 3,887,352
_3356
Pf6N2E2_3357 - Phosphoglucosamine mutase (EC 5.4.2.10), at 3,887,431 to 3,888,768
_3357
Position (kb)
3886
3887
3888 Strain fitness (log2 ratio)
-2
-1
0
1 at 3885.894 kb on - strand at 3885.894 kb on - strand at 3885.894 kb on - strand at 3885.894 kb on - strand at 3886.036 kb on - strand at 3886.036 kb on - strand at 3886.038 kb on - strand at 3886.038 kb on - strand at 3886.052 kb on - strand at 3886.052 kb on - strand at 3886.052 kb on - strand at 3886.078 kb on - strand at 3886.111 kb on - strand at 3886.111 kb on - strand at 3886.223 kb on - strand at 3886.246 kb on - strand at 3886.317 kb on - strand at 3886.317 kb on - strand at 3886.330 kb on - strand at 3887.448 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,885,894 - +0.2 3,885,894 - -0.3 3,885,894 - -0.7 3,885,894 - -0.2 3,886,036 - -0.1 3,886,036 - -1.7 3,886,038 - -1.9 3,886,038 - +0.0 3,886,052 - -1.5 3,886,052 - -1.9 3,886,052 - -0.2 3,886,078 - +0.1 3,886,111 - +0.0 3,886,111 - +0.3 3,886,223 - +1.0 3,886,246 - -1.4 3,886,317 - -0.9 3,886,317 - -0.1 3,886,330 - +0.2 3,887,448 + -0.9
Or see this region's nucleotide sequence