Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2410 and Pf6N2E2_2411 are separated by 134 nucleotides Pf6N2E2_2411 and Pf6N2E2_2412 are separated by 62 nucleotides Pf6N2E2_2412 and Pf6N2E2_2413 are separated by 93 nucleotides
Pf6N2E2_2410 - Citronellyl-CoA dehydrogenase, at 2,862,229 to 2,863,386
_2410
Pf6N2E2_2411 - Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4), at 2,863,521 to 2,865,491
_2411
Pf6N2E2_2412 - Inhibitor of the KinA pathway to sporulation, predicted exonuclease, at 2,865,554 to 2,866,096
_2412
Pf6N2E2_2413 - FIG074102: hypothetical protein, at 2,866,190 to 2,866,474
_2413
Position (kb)
2863
2864
2865
2866 Strain fitness (log2 ratio)
-2
-1
0
1 at 2862.670 kb on + strand, within Pf6N2E2_2410 at 2862.670 kb on + strand, within Pf6N2E2_2410 at 2862.670 kb on + strand, within Pf6N2E2_2410 at 2862.671 kb on - strand, within Pf6N2E2_2410 at 2862.671 kb on - strand, within Pf6N2E2_2410 at 2862.671 kb on - strand, within Pf6N2E2_2410 at 2862.671 kb on - strand, within Pf6N2E2_2410 at 2862.671 kb on - strand, within Pf6N2E2_2410 at 2862.741 kb on + strand, within Pf6N2E2_2410 at 2862.742 kb on - strand, within Pf6N2E2_2410 at 2862.742 kb on - strand, within Pf6N2E2_2410 at 2862.742 kb on - strand, within Pf6N2E2_2410 at 2863.018 kb on + strand, within Pf6N2E2_2410 at 2863.019 kb on - strand, within Pf6N2E2_2410 at 2863.144 kb on + strand, within Pf6N2E2_2410 at 2863.145 kb on - strand, within Pf6N2E2_2410 at 2863.145 kb on - strand, within Pf6N2E2_2410 at 2863.145 kb on - strand, within Pf6N2E2_2410 at 2863.145 kb on - strand, within Pf6N2E2_2410 at 2863.237 kb on + strand, within Pf6N2E2_2410 at 2863.490 kb on - strand at 2863.704 kb on + strand at 2863.704 kb on + strand at 2863.705 kb on - strand at 2863.705 kb on - strand at 2864.328 kb on + strand, within Pf6N2E2_2411 at 2864.328 kb on + strand, within Pf6N2E2_2411 at 2864.328 kb on + strand, within Pf6N2E2_2411 at 2864.328 kb on + strand, within Pf6N2E2_2411 at 2864.328 kb on + strand, within Pf6N2E2_2411 at 2864.379 kb on + strand, within Pf6N2E2_2411 at 2864.379 kb on + strand, within Pf6N2E2_2411 at 2864.545 kb on - strand, within Pf6N2E2_2411 at 2864.931 kb on + strand, within Pf6N2E2_2411 at 2864.932 kb on - strand, within Pf6N2E2_2411 at 2865.512 kb on + strand at 2865.860 kb on + strand, within Pf6N2E2_2412 at 2866.148 kb on + strand at 2866.149 kb on - strand at 2866.195 kb on + strand at 2866.195 kb on + strand at 2866.196 kb on - strand at 2866.196 kb on - strand at 2866.196 kb on - strand at 2866.208 kb on + strand at 2866.209 kb on - strand at 2866.289 kb on + strand, within Pf6N2E2_2413 at 2866.290 kb on - strand, within Pf6N2E2_2413 at 2866.451 kb on + strand at 2866.452 kb on - strand at 2866.485 kb on + strand at 2866.485 kb on + strand at 2866.485 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,862,670 + Pf6N2E2_2410 0.38 -0.8 2,862,670 + Pf6N2E2_2410 0.38 +0.7 2,862,670 + Pf6N2E2_2410 0.38 +0.1 2,862,671 - Pf6N2E2_2410 0.38 +0.1 2,862,671 - Pf6N2E2_2410 0.38 +0.1 2,862,671 - Pf6N2E2_2410 0.38 +0.9 2,862,671 - Pf6N2E2_2410 0.38 +0.5 2,862,671 - Pf6N2E2_2410 0.38 -0.6 2,862,741 + Pf6N2E2_2410 0.44 +0.9 2,862,742 - Pf6N2E2_2410 0.44 -0.6 2,862,742 - Pf6N2E2_2410 0.44 -0.3 2,862,742 - Pf6N2E2_2410 0.44 -0.7 2,863,018 + Pf6N2E2_2410 0.68 +0.9 2,863,019 - Pf6N2E2_2410 0.68 +0.5 2,863,144 + Pf6N2E2_2410 0.79 +0.4 2,863,145 - Pf6N2E2_2410 0.79 +0.7 2,863,145 - Pf6N2E2_2410 0.79 -1.3 2,863,145 - Pf6N2E2_2410 0.79 +0.1 2,863,145 - Pf6N2E2_2410 0.79 +0.0 2,863,237 + Pf6N2E2_2410 0.87 +0.4 2,863,490 - -1.2 2,863,704 + +0.8 2,863,704 + +0.1 2,863,705 - -0.5 2,863,705 - -0.5 2,864,328 + Pf6N2E2_2411 0.41 -0.3 2,864,328 + Pf6N2E2_2411 0.41 +0.5 2,864,328 + Pf6N2E2_2411 0.41 +1.3 2,864,328 + Pf6N2E2_2411 0.41 +0.1 2,864,328 + Pf6N2E2_2411 0.41 +0.2 2,864,379 + Pf6N2E2_2411 0.44 -0.2 2,864,379 + Pf6N2E2_2411 0.44 -0.5 2,864,545 - Pf6N2E2_2411 0.52 -1.4 2,864,931 + Pf6N2E2_2411 0.72 +0.1 2,864,932 - Pf6N2E2_2411 0.72 +0.2 2,865,512 + -1.2 2,865,860 + Pf6N2E2_2412 0.56 +1.3 2,866,148 + +0.6 2,866,149 - -0.8 2,866,195 + +0.4 2,866,195 + -0.1 2,866,196 - -0.1 2,866,196 - +0.4 2,866,196 - +0.9 2,866,208 + -2.2 2,866,209 - +1.1 2,866,289 + Pf6N2E2_2413 0.35 +0.0 2,866,290 - Pf6N2E2_2413 0.35 +0.8 2,866,451 + -1.2 2,866,452 - -0.3 2,866,485 + +0.9 2,866,485 + -0.1 2,866,485 + +1.5
Or see this region's nucleotide sequence