Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1395 and Pf6N2E2_1396 overlap by 4 nucleotides Pf6N2E2_1396 and Pf6N2E2_1397 overlap by 4 nucleotides Pf6N2E2_1397 and Pf6N2E2_1398 are separated by 147 nucleotides Pf6N2E2_1398 and Pf6N2E2_1399 are separated by 54 nucleotides
Pf6N2E2_1395 - Uncharacterized conserved protein, at 1,635,562 to 1,636,551
_1395
Pf6N2E2_1396 - ABC transporter, ATP-binding protein, at 1,636,548 to 1,637,279
_1396
Pf6N2E2_1397 - ABC transporter permease protein, at 1,637,276 to 1,638,067
_1397
Pf6N2E2_1398 - Rhodanese-related sulfurtransferase, at 1,638,215 to 1,638,748
_1398
Pf6N2E2_1399 - Transcriptional regulator, LuxR family, at 1,638,803 to 1,639,474
_1399
Position (kb)
1637
1638
1639 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1636.303 kb on - strand, within Pf6N2E2_1395 at 1636.482 kb on - strand at 1636.585 kb on - strand at 1636.585 kb on - strand at 1636.704 kb on + strand, within Pf6N2E2_1396 at 1636.704 kb on + strand, within Pf6N2E2_1396 at 1636.705 kb on - strand, within Pf6N2E2_1396 at 1637.450 kb on + strand, within Pf6N2E2_1397 at 1637.450 kb on + strand, within Pf6N2E2_1397 at 1637.450 kb on + strand, within Pf6N2E2_1397 at 1637.450 kb on + strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.451 kb on - strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.468 kb on + strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.469 kb on - strand, within Pf6N2E2_1397 at 1637.470 kb on + strand, within Pf6N2E2_1397 at 1637.470 kb on + strand, within Pf6N2E2_1397 at 1637.471 kb on - strand, within Pf6N2E2_1397 at 1637.649 kb on - strand, within Pf6N2E2_1397 at 1637.676 kb on - strand, within Pf6N2E2_1397 at 1637.853 kb on - strand, within Pf6N2E2_1397 at 1637.951 kb on + strand, within Pf6N2E2_1397 at 1637.952 kb on - strand, within Pf6N2E2_1397 at 1638.000 kb on + strand at 1638.001 kb on - strand at 1638.130 kb on + strand at 1638.131 kb on - strand at 1638.184 kb on + strand at 1638.184 kb on + strand at 1638.184 kb on + strand at 1638.185 kb on - strand at 1638.208 kb on - strand at 1638.536 kb on + strand, within Pf6N2E2_1398 at 1638.536 kb on + strand, within Pf6N2E2_1398 at 1638.596 kb on + strand, within Pf6N2E2_1398 at 1638.633 kb on + strand, within Pf6N2E2_1398 at 1638.634 kb on - strand, within Pf6N2E2_1398 at 1638.657 kb on - strand, within Pf6N2E2_1398 at 1638.657 kb on - strand, within Pf6N2E2_1398 at 1638.668 kb on + strand, within Pf6N2E2_1398 at 1638.668 kb on + strand, within Pf6N2E2_1398 at 1638.792 kb on + strand at 1638.812 kb on + strand at 1638.812 kb on + strand at 1638.813 kb on - strand at 1638.813 kb on - strand at 1638.814 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 1,636,303 - Pf6N2E2_1395 0.75 -0.3 1,636,482 - +2.2 1,636,585 - +2.5 1,636,585 - +1.4 1,636,704 + Pf6N2E2_1396 0.21 +2.6 1,636,704 + Pf6N2E2_1396 0.21 +1.9 1,636,705 - Pf6N2E2_1396 0.21 -0.1 1,637,450 + Pf6N2E2_1397 0.22 +0.2 1,637,450 + Pf6N2E2_1397 0.22 +1.3 1,637,450 + Pf6N2E2_1397 0.22 +1.7 1,637,450 + Pf6N2E2_1397 0.22 +0.4 1,637,451 - Pf6N2E2_1397 0.22 +1.3 1,637,451 - Pf6N2E2_1397 0.22 +0.7 1,637,451 - Pf6N2E2_1397 0.22 +0.2 1,637,451 - Pf6N2E2_1397 0.22 +3.1 1,637,451 - Pf6N2E2_1397 0.22 +0.7 1,637,451 - Pf6N2E2_1397 0.22 +1.7 1,637,451 - Pf6N2E2_1397 0.22 +1.0 1,637,451 - Pf6N2E2_1397 0.22 +2.0 1,637,451 - Pf6N2E2_1397 0.22 +1.2 1,637,451 - Pf6N2E2_1397 0.22 +2.6 1,637,451 - Pf6N2E2_1397 0.22 +0.4 1,637,451 - Pf6N2E2_1397 0.22 +1.2 1,637,468 + Pf6N2E2_1397 0.24 +0.5 1,637,468 + Pf6N2E2_1397 0.24 +1.2 1,637,468 + Pf6N2E2_1397 0.24 +1.7 1,637,468 + Pf6N2E2_1397 0.24 +1.9 1,637,468 + Pf6N2E2_1397 0.24 +0.9 1,637,468 + Pf6N2E2_1397 0.24 +2.3 1,637,468 + Pf6N2E2_1397 0.24 +2.0 1,637,468 + Pf6N2E2_1397 0.24 +1.9 1,637,468 + Pf6N2E2_1397 0.24 +1.0 1,637,468 + Pf6N2E2_1397 0.24 +1.4 1,637,468 + Pf6N2E2_1397 0.24 +2.2 1,637,468 + Pf6N2E2_1397 0.24 +1.3 1,637,469 - Pf6N2E2_1397 0.24 +1.0 1,637,469 - Pf6N2E2_1397 0.24 +0.0 1,637,469 - Pf6N2E2_1397 0.24 +2.1 1,637,469 - Pf6N2E2_1397 0.24 +1.6 1,637,469 - Pf6N2E2_1397 0.24 +1.7 1,637,469 - Pf6N2E2_1397 0.24 +2.0 1,637,469 - Pf6N2E2_1397 0.24 +2.3 1,637,469 - Pf6N2E2_1397 0.24 +0.7 1,637,469 - Pf6N2E2_1397 0.24 +2.6 1,637,469 - Pf6N2E2_1397 0.24 +0.7 1,637,469 - Pf6N2E2_1397 0.24 +2.2 1,637,469 - Pf6N2E2_1397 0.24 +0.4 1,637,470 + Pf6N2E2_1397 0.24 +1.4 1,637,470 + Pf6N2E2_1397 0.24 +2.7 1,637,471 - Pf6N2E2_1397 0.25 +2.2 1,637,649 - Pf6N2E2_1397 0.47 +1.7 1,637,676 - Pf6N2E2_1397 0.51 -1.0 1,637,853 - Pf6N2E2_1397 0.73 +2.5 1,637,951 + Pf6N2E2_1397 0.85 +1.2 1,637,952 - Pf6N2E2_1397 0.85 +2.1 1,638,000 + +0.2 1,638,001 - +0.9 1,638,130 + +1.1 1,638,131 - +1.6 1,638,184 + +1.4 1,638,184 + +1.2 1,638,184 + +1.3 1,638,185 - +1.7 1,638,208 - +1.2 1,638,536 + Pf6N2E2_1398 0.60 -0.3 1,638,536 + Pf6N2E2_1398 0.60 +2.2 1,638,596 + Pf6N2E2_1398 0.71 +2.2 1,638,633 + Pf6N2E2_1398 0.78 +0.8 1,638,634 - Pf6N2E2_1398 0.78 +0.8 1,638,657 - Pf6N2E2_1398 0.83 +0.9 1,638,657 - Pf6N2E2_1398 0.83 +1.8 1,638,668 + Pf6N2E2_1398 0.85 +0.9 1,638,668 + Pf6N2E2_1398 0.85 +3.5 1,638,792 + +2.2 1,638,812 + +1.0 1,638,812 + +1.0 1,638,813 - +1.6 1,638,813 - +2.2 1,638,814 + +2.3
Or see this region's nucleotide sequence