Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1651 and HP15_1652 are separated by 66 nucleotides HP15_1652 and HP15_1653 are separated by 242 nucleotides HP15_1653 and HP15_1654 are separated by 46 nucleotides
HP15_1651: HP15_1651 - iron-sulfur cluster-binding protein, at 1,747,457 to 1,748,536
_1651
HP15_1652: HP15_1652 - disulfide isomerase/thiol-disulfide oxidase-like protein, at 1,748,603 to 1,749,370
_1652
HP15_1653: HP15_1653 - protein containing DUF1348, at 1,749,613 to 1,750,083
_1653
HP15_1654: HP15_1654 - RNA polymerase, sigma-24 subunit, ECF subfamily, at 1,750,130 to 1,750,690
_1654
Position (kb)
1748
1749
1750 Strain fitness (log2 ratio)
-1
0
1 at 1747.608 kb on + strand, within HP15_1651 at 1747.638 kb on - strand, within HP15_1651 at 1747.664 kb on - strand, within HP15_1651 at 1747.695 kb on - strand, within HP15_1651 at 1747.899 kb on + strand, within HP15_1651 at 1747.993 kb on + strand, within HP15_1651 at 1748.015 kb on - strand, within HP15_1651 at 1748.061 kb on + strand, within HP15_1651 at 1748.069 kb on - strand, within HP15_1651 at 1748.199 kb on - strand, within HP15_1651 at 1748.384 kb on + strand, within HP15_1651 at 1748.465 kb on - strand at 1748.492 kb on + strand at 1748.533 kb on + strand at 1748.551 kb on + strand at 1748.633 kb on + strand at 1748.741 kb on + strand, within HP15_1652 at 1748.748 kb on + strand, within HP15_1652 at 1748.749 kb on - strand, within HP15_1652 at 1748.769 kb on + strand, within HP15_1652 at 1748.906 kb on + strand, within HP15_1652 at 1748.947 kb on + strand, within HP15_1652 at 1749.088 kb on + strand, within HP15_1652 at 1749.177 kb on - strand, within HP15_1652 at 1749.247 kb on + strand, within HP15_1652 at 1749.404 kb on + strand at 1749.651 kb on + strand at 1749.839 kb on + strand, within HP15_1653 at 1749.973 kb on - strand, within HP15_1653 at 1749.990 kb on + strand, within HP15_1653 at 1750.087 kb on - strand at 1750.087 kb on - strand at 1750.123 kb on + strand at 1750.131 kb on - strand at 1750.133 kb on + strand at 1750.171 kb on - strand at 1750.204 kb on + strand, within HP15_1654 at 1750.204 kb on - strand, within HP15_1654 at 1750.221 kb on - strand, within HP15_1654 at 1750.356 kb on - strand, within HP15_1654
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,747,608 + HP15_1651 0.14 -1.1 1,747,638 - HP15_1651 0.17 -1.0 1,747,664 - HP15_1651 0.19 +0.5 1,747,695 - HP15_1651 0.22 +0.0 1,747,899 + HP15_1651 0.41 -0.0 1,747,993 + HP15_1651 0.50 +0.3 1,748,015 - HP15_1651 0.52 +0.3 1,748,061 + HP15_1651 0.56 +0.2 1,748,069 - HP15_1651 0.57 +1.6 1,748,199 - HP15_1651 0.69 +0.3 1,748,384 + HP15_1651 0.86 -0.1 1,748,465 - +0.0 1,748,492 + +0.5 1,748,533 + +0.2 1,748,551 + -0.7 1,748,633 + +0.1 1,748,741 + HP15_1652 0.18 +0.0 1,748,748 + HP15_1652 0.19 +0.2 1,748,749 - HP15_1652 0.19 +1.4 1,748,769 + HP15_1652 0.22 -0.4 1,748,906 + HP15_1652 0.39 -1.2 1,748,947 + HP15_1652 0.45 +0.0 1,749,088 + HP15_1652 0.63 -0.7 1,749,177 - HP15_1652 0.75 -0.8 1,749,247 + HP15_1652 0.84 +0.3 1,749,404 + +0.3 1,749,651 + -1.3 1,749,839 + HP15_1653 0.48 +0.3 1,749,973 - HP15_1653 0.76 +0.5 1,749,990 + HP15_1653 0.80 +0.6 1,750,087 - +0.1 1,750,087 - -0.2 1,750,123 + -0.2 1,750,131 - +0.7 1,750,133 + +0.6 1,750,171 - +0.3 1,750,204 + HP15_1654 0.13 -0.2 1,750,204 - HP15_1654 0.13 +0.5 1,750,221 - HP15_1654 0.16 -0.3 1,750,356 - HP15_1654 0.40 -0.3
Or see this region's nucleotide sequence