Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_124 and HP15_125 overlap by 1 nucleotides HP15_125 and HP15_126 are separated by 68 nucleotides HP15_126 and HP15_127 are separated by 27 nucleotides
HP15_124: HP15_124 - hypothetical protein, at 134,036 to 134,272
_124
HP15_125: HP15_125 - conserved hypothetical protein, at 134,272 to 134,613
_125
HP15_126: HP15_126 - single-strand DNA-binding protein, at 134,682 to 135,080
_126
HP15_127: HP15_127 - hypothetical protein, at 135,108 to 135,353
_127
Position (kb) 134
135 Strain fitness (log2 ratio) -2
-1
0
1 at 133.082 kb on + strand at 133.082 kb on + strand at 133.087 kb on + strand at 133.095 kb on - strand at 133.101 kb on + strand at 133.103 kb on + strand at 133.124 kb on + strand at 133.129 kb on + strand at 133.129 kb on + strand at 133.189 kb on - strand at 133.194 kb on + strand at 133.255 kb on + strand at 133.264 kb on - strand at 133.272 kb on + strand at 133.290 kb on + strand at 133.309 kb on + strand at 133.356 kb on - strand at 133.378 kb on - strand at 133.440 kb on - strand at 133.491 kb on + strand at 133.499 kb on + strand at 133.596 kb on + strand at 133.646 kb on - strand at 133.737 kb on - strand at 133.745 kb on - strand at 133.758 kb on - strand at 133.973 kb on - strand at 134.033 kb on + strand at 134.079 kb on - strand, within HP15_124 at 134.126 kb on + strand, within HP15_124 at 134.185 kb on + strand, within HP15_124 at 134.185 kb on + strand, within HP15_124 at 134.193 kb on - strand, within HP15_124 at 134.193 kb on - strand, within HP15_124 at 134.206 kb on + strand, within HP15_124 at 134.226 kb on + strand, within HP15_124 at 134.231 kb on + strand, within HP15_124 at 134.239 kb on - strand, within HP15_124 at 134.245 kb on + strand, within HP15_124 at 134.245 kb on + strand, within HP15_124 at 134.288 kb on - strand at 134.305 kb on + strand at 134.313 kb on - strand, within HP15_125 at 134.313 kb on - strand, within HP15_125 at 134.324 kb on + strand, within HP15_125 at 134.324 kb on + strand, within HP15_125 at 134.324 kb on + strand, within HP15_125 at 134.409 kb on - strand, within HP15_125 at 134.421 kb on - strand, within HP15_125 at 134.476 kb on - strand, within HP15_125 at 134.673 kb on - strand at 134.733 kb on + strand, within HP15_126 at 134.791 kb on - strand, within HP15_126 at 134.791 kb on - strand, within HP15_126 at 134.820 kb on - strand, within HP15_126 at 134.881 kb on + strand, within HP15_126 at 134.896 kb on - strand, within HP15_126 at 134.939 kb on - strand, within HP15_126 at 134.986 kb on + strand, within HP15_126 at 135.096 kb on + strand at 135.216 kb on - strand, within HP15_127
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 133,082 + +0.3 133,082 + +0.8 133,087 + -0.0 133,095 - +0.7 133,101 + -0.1 133,103 + +0.8 133,124 + -0.5 133,129 + -0.2 133,129 + +0.5 133,189 - -0.4 133,194 + +0.1 133,255 + -0.5 133,264 - -0.6 133,272 + +0.8 133,290 + +0.1 133,309 + +0.3 133,356 - -0.1 133,378 - +0.1 133,440 - +0.7 133,491 + +0.3 133,499 + -0.2 133,596 + +0.1 133,646 - -0.8 133,737 - +0.3 133,745 - +0.3 133,758 - -0.3 133,973 - +0.3 134,033 + -0.1 134,079 - HP15_124 0.18 -0.1 134,126 + HP15_124 0.38 -1.5 134,185 + HP15_124 0.63 -0.4 134,185 + HP15_124 0.63 -0.1 134,193 - HP15_124 0.66 -0.8 134,193 - HP15_124 0.66 -0.0 134,206 + HP15_124 0.72 -0.8 134,226 + HP15_124 0.80 +0.6 134,231 + HP15_124 0.82 +0.0 134,239 - HP15_124 0.86 -0.8 134,245 + HP15_124 0.88 -0.3 134,245 + HP15_124 0.88 -0.8 134,288 - -0.4 134,305 + -0.2 134,313 - HP15_125 0.12 +0.3 134,313 - HP15_125 0.12 +0.6 134,324 + HP15_125 0.15 +0.1 134,324 + HP15_125 0.15 -0.2 134,324 + HP15_125 0.15 -0.2 134,409 - HP15_125 0.40 +0.1 134,421 - HP15_125 0.44 -0.1 134,476 - HP15_125 0.60 -1.8 134,673 - +0.3 134,733 + HP15_126 0.13 -0.1 134,791 - HP15_126 0.27 +0.3 134,791 - HP15_126 0.27 -0.9 134,820 - HP15_126 0.35 +0.5 134,881 + HP15_126 0.50 -0.1 134,896 - HP15_126 0.54 +0.3 134,939 - HP15_126 0.64 -0.2 134,986 + HP15_126 0.76 +0.3 135,096 + +0.6 135,216 - HP15_127 0.44 -0.1
Or see this region's nucleotide sequence