Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27930

Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
5,791,163	+				+0.4
5,791,171	-				+0.2
5,791,198	+				+0.4
5,791,215	+				+2.0
5,791,274	-				+0.1
5,791,290	-		BWI76_RS27925	0.10	+0.4
5,791,337	+		BWI76_RS27925	0.15	+0.2
5,791,337	+		BWI76_RS27925	0.15	+0.3
5,791,337	+		BWI76_RS27925	0.15	-1.2
5,791,337	+		BWI76_RS27925	0.15	+0.5
5,791,345	-		BWI76_RS27925	0.16	-0.7
5,791,345	-		BWI76_RS27925	0.16	-0.7
5,791,345	-		BWI76_RS27925	0.16	-2.1
5,791,365	-		BWI76_RS27925	0.18	-0.6
5,791,416	+		BWI76_RS27925	0.24	+0.4
5,791,573	+		BWI76_RS27925	0.40	-0.2
5,791,686	-		BWI76_RS27925	0.52	+0.6
5,791,686	-		BWI76_RS27925	0.52	-0.6
5,791,858	+		BWI76_RS27925	0.70	-0.6
5,791,858	+		BWI76_RS27925	0.70	+0.4
5,791,858	+		BWI76_RS27925	0.70	-0.2
5,791,866	-		BWI76_RS27925	0.71	+0.3
5,791,910	+		BWI76_RS27925	0.76	-0.3
5,791,914	-				+2.1
5,791,917	-		BWI76_RS27925	0.77	-0.2
5,791,939	+		BWI76_RS27925	0.79	-1.5
5,791,939	+		BWI76_RS27925	0.79	+1.5
5,791,939	+		BWI76_RS27925	0.79	-0.5
5,791,939	+		BWI76_RS27925	0.79	-0.4
5,791,939	+		BWI76_RS27925	0.79	+0.5
5,791,939	+		BWI76_RS27925	0.79	+0.1
5,791,939	+		BWI76_RS27925	0.79	-0.2
5,791,939	+		BWI76_RS27925	0.79	-0.2
5,791,947	-				+0.7
5,791,947	-		BWI76_RS27925	0.80	-0.1
5,791,947	-		BWI76_RS27925	0.80	-2.8
5,791,947	-		BWI76_RS27925	0.80	+0.4
5,791,947	-		BWI76_RS27925	0.80	+0.0
5,791,947	-		BWI76_RS27925	0.80	-1.4
5,791,947	-		BWI76_RS27925	0.80	+1.5
5,791,947	-		BWI76_RS27925	0.80	-1.2
5,791,947	-		BWI76_RS27925	0.80	-0.4
5,791,947	-		BWI76_RS27925	0.80	+0.2
5,791,947	-		BWI76_RS27925	0.80	-0.2
5,791,980	-		BWI76_RS27925	0.83	-0.5
5,791,982	+		BWI76_RS27925	0.83	-1.9
5,791,997	-		BWI76_RS27925	0.85	+0.1
5,791,999	+		BWI76_RS27925	0.85	+0.1
5,792,018	+		BWI76_RS27925	0.87	-0.8
5,792,026	-		BWI76_RS27925	0.88	-0.4
5,792,026	-		BWI76_RS27925	0.88	+1.2
5,792,026	-		BWI76_RS27925	0.88	-1.4
5,792,027	+		BWI76_RS27925	0.88	-0.9
5,792,033	+		BWI76_RS27925	0.89	-1.1
5,792,035	-		BWI76_RS27925	0.89	-1.8
5,792,041	-		BWI76_RS27925	0.90	-1.7
5,792,057	+				+0.7
5,792,072	-				+0.0
5,792,072	-				-1.6
5,792,072	-				-0.9
5,792,076	+				-0.2
5,792,076	+				+0.0
5,792,076	+				+0.2
5,792,076	+				-2.3
5,792,076	+				-2.3
5,792,076	+				+0.5
5,792,076	+				+0.0
5,792,076	+				-0.4
5,792,076	+				-0.7
5,792,076	+				-2.1
5,792,076	+				+0.8
5,792,078	+				+1.2
5,792,078	+				-0.7
5,792,078	+				-2.0
5,792,078	+				-0.3
5,792,078	+				+0.8
5,792,078	+				+0.8
5,792,081	-				-1.2
5,792,084	-				-0.5
5,792,084	-				+0.2
5,792,084	-				-0.1
5,792,084	-				+0.2
5,792,084	-				+2.1
5,792,084	-				+0.3
5,792,084	-				+0.6
5,792,084	-				-0.4
5,792,084	-				+0.1
5,792,084	-				-2.1
5,792,084	-				-0.4
5,792,084	-				-0.2
5,792,084	-				-0.3
5,792,084	-				-1.7
5,792,084	-				-1.2
5,792,084	-				-0.7
5,792,084	-				-0.5
5,792,084	-				+0.1
5,792,084	-				-0.8
5,792,084	-				-0.2
5,792,084	-				-0.0
5,792,084	-				-2.1
5,792,084	-				-0.2
5,792,084	-				-1.3
5,792,084	-				+0.0
5,792,084	-				+0.8
5,792,084	-				-0.3
5,792,086	-				+0.3
5,792,086	-				-1.1
5,792,086	-				-0.8
5,792,086	-				+0.2
5,792,086	-				-0.3
5,792,086	-				+0.1
5,792,086	-				+1.5
5,792,086	-				-0.6
5,792,086	-				+0.6
5,792,086	-				+0.6
5,792,086	-				-0.8
5,792,086	-				-0.3
5,792,086	-				-0.0
5,792,086	-				-0.3
5,792,088	+				-1.2
5,792,088	+				+0.7
5,792,088	+				+1.4
5,792,088	+				-0.3
5,792,096	-				-0.2
5,792,096	-				-0.6
5,792,096	-				+0.4
5,792,103	+				+0.5
5,792,111	-				-1.0
5,792,174	-				-0.1
5,792,175	+				-2.8
5,792,175	+				-2.2
5,792,175	+				-0.0
5,792,175	+				+0.3
5,792,175	+				-0.6
5,792,175	+				-0.0
5,792,175	+				+0.2
5,792,178	+				-0.8
5,792,183	+				-0.8
5,792,183	+				-0.7
5,792,183	-				+1.2
5,792,183	-				-0.2
5,792,183	-				-0.0
5,792,183	-				-0.6
5,792,183	-				+0.4
5,792,183	-				-2.1
5,792,183	-				-0.6
5,792,183	-				+0.5
5,792,183	-				-2.0
5,792,183	-				-0.1
5,792,183	-				+0.1
5,792,183	-				+0.1
5,792,183	-				-0.6
5,792,183	-				+0.3
5,792,183	-				-0.3
5,792,183	-				+0.3
5,792,183	-				-0.3
5,792,183	-				-1.2
5,792,188	+				-0.6
5,792,188	+				+0.4
5,792,188	+				+0.2
5,792,188	+				-1.0
5,792,190	+				+0.8
5,792,196	-				+0.1
5,792,196	-				+0.3
5,792,196	-				+0.3
5,792,196	-				+1.2
5,792,196	-				+1.6
5,792,196	-				-0.3
5,792,196	-				+0.2
5,792,196	-				-0.2
5,792,196	-				-0.7
5,792,196	-				+0.2
5,792,196	-				+0.2
5,792,196	-				-1.7
5,792,196	-				-0.6
5,792,208	+				+0.2
5,792,225	-				-0.2
5,792,240	-				-1.0
5,792,249	+				-0.4
5,792,249	+				+0.3
5,792,254	+				+0.3
5,792,257	-				-0.1
5,792,257	-				+0.2
5,792,266	+				-0.3
5,792,273	-				-0.3
5,792,281	-				+0.4
5,792,285	+		BWI76_RS27930	0.10	+1.5
5,792,285	+		BWI76_RS27930	0.10	-0.1
5,792,285	+		BWI76_RS27930	0.10	+0.1
5,792,285	+		BWI76_RS27930	0.10	+1.1
5,792,286	+		BWI76_RS27930	0.10	-0.4
5,792,286	+		BWI76_RS27930	0.10	+0.0
5,792,286	-		BWI76_RS27930	0.10	+0.1
5,792,293	-		BWI76_RS27930	0.11	+0.8
5,792,293	-		BWI76_RS27930	0.11	-0.8
5,792,293	-		BWI76_RS27930	0.11	+0.9
5,792,293	-		BWI76_RS27930	0.11	+1.0
5,792,293	-		BWI76_RS27930	0.11	-0.4
5,792,293	-		BWI76_RS27930	0.11	-0.2
5,792,293	-		BWI76_RS27930	0.11	-0.4
5,792,293	-		BWI76_RS27930	0.11	+0.4
5,792,293	-		BWI76_RS27930	0.11	+0.1
5,792,293	-		BWI76_RS27930	0.11	-0.4
5,792,293	-		BWI76_RS27930	0.11	-0.6
5,792,293	-		BWI76_RS27930	0.11	+1.2
5,792,294	-		BWI76_RS27930	0.11	-0.7
5,792,294	-		BWI76_RS27930	0.11	-0.1
5,792,304	-		BWI76_RS27930	0.12	+0.6
5,792,308	+		BWI76_RS27930	0.12	+0.5
5,792,313	+		BWI76_RS27930	0.12	-0.6
5,792,313	+		BWI76_RS27930	0.12	-0.5
5,792,313	+		BWI76_RS27930	0.12	-1.2
5,792,313	+		BWI76_RS27930	0.12	+0.2
5,792,313	+		BWI76_RS27930	0.12	-0.3
5,792,313	+		BWI76_RS27930	0.12	-0.0
5,792,313	+		BWI76_RS27930	0.12	-0.5
5,792,313	+		BWI76_RS27930	0.12	+1.0
5,792,313	+		BWI76_RS27930	0.12	+0.7
5,792,313	+		BWI76_RS27930	0.12	-0.6
5,792,313	+		BWI76_RS27930	0.12	+0.1
5,792,313	+		BWI76_RS27930	0.12	-2.8
5,792,313	+		BWI76_RS27930	0.12	+0.6
5,792,313	+		BWI76_RS27930	0.12	-1.7
5,792,313	+		BWI76_RS27930	0.12	-0.7
5,792,313	+		BWI76_RS27930	0.12	+0.9
5,792,313	+		BWI76_RS27930	0.12	+0.8
5,792,314	+		BWI76_RS27930	0.12	+0.9
5,792,316	-		BWI76_RS27930	0.13	-0.2
5,792,321	-		BWI76_RS27930	0.13	-0.7
5,792,321	-		BWI76_RS27930	0.13	-0.4
5,792,321	-		BWI76_RS27930	0.13	-0.3
5,792,321	-		BWI76_RS27930	0.13	+0.5
5,792,321	-		BWI76_RS27930	0.13	+0.7
5,792,321	-		BWI76_RS27930	0.13	+0.3
5,792,321	-		BWI76_RS27930	0.13	-0.6
5,792,321	-		BWI76_RS27930	0.13	-0.4
5,792,321	-		BWI76_RS27930	0.13	-0.6
5,792,321	-		BWI76_RS27930	0.13	+1.9
5,792,321	-		BWI76_RS27930	0.13	+1.2
5,792,321	-		BWI76_RS27930	0.13	+0.7
5,792,321	-		BWI76_RS27930	0.13	-0.1
5,792,321	-		BWI76_RS27930	0.13	-1.3
5,792,321	-		BWI76_RS27930	0.13	+0.7
5,792,321	-		BWI76_RS27930	0.13	+2.0
5,792,321	-		BWI76_RS27930	0.13	-0.5
5,792,321	-		BWI76_RS27930	0.13	-1.0
5,792,321	-		BWI76_RS27930	0.13	-0.3
5,792,321	-		BWI76_RS27930	0.13	-0.4
5,792,321	-		BWI76_RS27930	0.13	+0.2
5,792,321	-		BWI76_RS27930	0.13	+0.2
5,792,321	-		BWI76_RS27930	0.13	-0.7
5,792,321	-		BWI76_RS27930	0.13	+0.6
5,792,321	-		BWI76_RS27930	0.13	+0.3
5,792,321	-		BWI76_RS27930	0.13	-0.8
5,792,321	-		BWI76_RS27930	0.13	+0.1
5,792,321	-		BWI76_RS27930	0.13	-0.1
5,792,321	-		BWI76_RS27930	0.13	+0.3
5,792,321	-		BWI76_RS27930	0.13	-1.6
5,792,321	-		BWI76_RS27930	0.13	-0.4
5,792,321	-		BWI76_RS27930	0.13	+0.8
5,792,321	-		BWI76_RS27930	0.13	+0.1
5,792,321	-		BWI76_RS27930	0.13	+0.3
5,792,321	-		BWI76_RS27930	0.13	+0.4
5,792,321	-		BWI76_RS27930	0.13	-0.4
5,792,322	-		BWI76_RS27930	0.13	-0.8
5,792,322	-		BWI76_RS27930	0.13	-0.3
5,792,322	-		BWI76_RS27930	0.13	+0.5
5,792,357	-		BWI76_RS27930	0.16	-0.3
5,792,375	-		BWI76_RS27930	0.17	-1.6
5,792,393	-		BWI76_RS27930	0.18	-1.5
5,792,393	-		BWI76_RS27930	0.18	+0.2
5,792,418	+		BWI76_RS27930	0.20	+0.8
5,792,418	+		BWI76_RS27930	0.20	-0.9
5,792,418	+		BWI76_RS27930	0.20	-0.5
5,792,418	+		BWI76_RS27930	0.20	+0.7
5,792,421	-		BWI76_RS27930	0.21	-1.0
5,792,421	-		BWI76_RS27930	0.21	-0.2
5,792,423	+		BWI76_RS27930	0.21	-0.4
5,792,423	+		BWI76_RS27930	0.21	-0.1
5,792,425	+		BWI76_RS27930	0.21	+0.8
5,792,425	+		BWI76_RS27930	0.21	-2.4
5,792,425	+		BWI76_RS27930	0.21	-2.3
5,792,426	-		BWI76_RS27930	0.21	-0.2
5,792,426	-		BWI76_RS27930	0.21	+1.6
5,792,426	-		BWI76_RS27930	0.21	+1.0
5,792,426	-		BWI76_RS27930	0.21	-0.5
5,792,426	-		BWI76_RS27930	0.21	+0.6
5,792,426	-		BWI76_RS27930	0.21	+1.0
5,792,430	+		BWI76_RS27930	0.21	+0.5
5,792,431	-				+1.6
5,792,431	-		BWI76_RS27930	0.21	-0.1
5,792,431	-		BWI76_RS27930	0.21	-0.2
5,792,433	-		BWI76_RS27930	0.21	-0.3
5,792,433	-		BWI76_RS27930	0.21	-0.4
5,792,433	-		BWI76_RS27930	0.21	-0.2
5,792,436	+		BWI76_RS27930	0.22	+1.3
5,792,443	-		BWI76_RS27930	0.22	-0.4
5,792,445	+		BWI76_RS27930	0.22	-1.3
5,792,451	+		BWI76_RS27930	0.23	+0.1
5,792,451	+		BWI76_RS27930	0.23	-1.9
5,792,451	+		BWI76_RS27930	0.23	-0.4
5,792,451	+		BWI76_RS27930	0.23	-0.5
5,792,451	+		BWI76_RS27930	0.23	+1.1
5,792,451	+		BWI76_RS27930	0.23	-0.3
5,792,451	+		BWI76_RS27930	0.23	+0.5
5,792,451	+		BWI76_RS27930	0.23	+0.5
5,792,459	-		BWI76_RS27930	0.23	+0.5
5,792,459	-		BWI76_RS27930	0.23	-0.3
5,792,459	-		BWI76_RS27930	0.23	-0.2
5,792,459	-		BWI76_RS27930	0.23	-1.3
5,792,459	-		BWI76_RS27930	0.23	+0.2
5,792,459	-		BWI76_RS27930	0.23	-0.2
5,792,459	-		BWI76_RS27930	0.23	+0.7
5,792,459	-		BWI76_RS27930	0.23	-0.3
5,792,459	-		BWI76_RS27930	0.23	+0.4
5,792,459	-		BWI76_RS27930	0.23	-0.5
5,792,472	+		BWI76_RS27930	0.24	+1.2
5,792,482	+		BWI76_RS27930	0.25	-1.7
5,792,482	-		BWI76_RS27930	0.25	-0.4
5,792,491	+		BWI76_RS27930	0.26	-0.3
5,792,494	-		BWI76_RS27930	0.26	-0.4
5,792,496	+		BWI76_RS27930	0.26	-0.0
5,792,498	-		BWI76_RS27930	0.26	+0.3
5,792,499	-		BWI76_RS27930	0.26	-0.8
5,792,504	-		BWI76_RS27930	0.27	-0.9
5,792,504	-		BWI76_RS27930	0.27	+0.1
5,792,504	-		BWI76_RS27930	0.27	+0.0
5,792,512	+		BWI76_RS27930	0.27	-0.1
5,792,513	-				-0.2
5,792,520	-		BWI76_RS27930	0.28	-0.9
5,792,524	+		BWI76_RS27930	0.28	+0.3
5,792,524	+		BWI76_RS27930	0.28	+1.7
5,792,524	+		BWI76_RS27930	0.28	-1.2
5,792,524	+		BWI76_RS27930	0.28	+0.1
5,792,524	-		BWI76_RS27930	0.28	+0.9
5,792,526	-		BWI76_RS27930	0.29	-0.3
5,792,527	-		BWI76_RS27930	0.29	-1.4
5,792,532	-		BWI76_RS27930	0.29	-0.9
5,792,532	-		BWI76_RS27930	0.29	-0.2
5,792,532	-		BWI76_RS27930	0.29	-0.9
5,792,532	-		BWI76_RS27930	0.29	+0.2
5,792,553	+		BWI76_RS27930	0.31	+0.9
5,792,553	+		BWI76_RS27930	0.31	-1.6
5,792,553	+		BWI76_RS27930	0.31	-0.4
5,792,553	+		BWI76_RS27930	0.31	-0.2
5,792,553	+		BWI76_RS27930	0.31	+0.2
5,792,561	-		BWI76_RS27930	0.31	-0.6
5,792,561	-		BWI76_RS27930	0.31	-0.4
5,792,561	-		BWI76_RS27930	0.31	+0.0
5,792,561	-		BWI76_RS27930	0.31	-2.2
5,792,563	-		BWI76_RS27930	0.31	+0.3
5,792,578	-		BWI76_RS27930	0.32	+0.9
5,792,648	-		BWI76_RS27930	0.38	+1.7
5,792,648	-		BWI76_RS27930	0.38	+0.3
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