Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01425

Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS01420 and BWI76_RS01425 overlap by 4 nucleotidesBWI76_RS01425 and BWI76_RS01430 are separated by 25 nucleotides BWI76_RS01420: BWI76_RS01420 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 290,636 to 291,664 _RS01420 BWI76_RS01425: BWI76_RS01425 - bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor, at 291,661 to 292,623 _RS01425 BWI76_RS01430: BWI76_RS01430 - type I pantothenate kinase, at 292,649 to 293,599 _RS01430 Position (kb) 291 292 293Strain fitness (log2 ratio) -1 0 1at 292.602 kb on + strandat 293.610 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
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292,602 + +1.0
293,610 - -0.8

Or see this region's nucleotide sequence