Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3013

Experiment: Formate/Acetate-Sulfate (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-60 mM)
3,125,979	+		DVU3012	0.53	+0.9
3,126,087	-		DVU3012	0.58	-0.7
3,126,130	+		DVU3012	0.61	+0.1
3,126,179	+		DVU3012	0.64	+0.1
3,126,187	-		DVU3012	0.64	-0.3
3,126,208	-		DVU3012	0.65	+0.3
3,126,212	+		DVU3012	0.65	+0.7
3,126,234	+		DVU3012	0.67	-0.8
3,126,235	-		DVU3012	0.67	-0.6
3,126,243	+		DVU3012	0.67	+0.1
3,126,292	+		DVU3012	0.70	-0.0
3,126,317	+		DVU3012	0.71	+0.1
3,126,327	-		DVU3012	0.72	+0.9
3,126,444	+		DVU3012	0.78	+0.0
3,126,468	+		DVU3012	0.80	-0.0
3,126,474	-		DVU3012	0.80	-1.4
3,126,523	+		DVU3012	0.83	-0.4
3,126,529	-		DVU3012	0.83	-0.5
3,126,558	+		DVU3012	0.85	+0.0
3,126,558	+		DVU3012	0.85	-0.1
3,126,558	+		DVU3012	0.85	-0.3
3,126,564	-		DVU3012	0.85	+0.3
3,126,566	-		DVU3012	0.85	+0.2
3,126,566	-		DVU3012	0.85	+1.0
3,126,606	-		DVU3012	0.87	-0.2
3,126,752	-				-0.6
3,126,762	-				+0.1
3,126,882	-				-0.3
3,126,961	-				-0.3
3,126,961	-				-1.9
3,127,017	+				-0.1
3,127,017	+				+0.6
3,127,065	+	dmt	DVU3013	0.10	+0.2
3,127,065	+	dmt	DVU3013	0.10	+0.6
3,127,073	-	dmt	DVU3013	0.11	-0.8
3,127,073	-	dmt	DVU3013	0.11	-0.4
3,127,080	-	dmt	DVU3013	0.11	+0.1
3,127,160	-	dmt	DVU3013	0.16	+0.9
3,127,177	-	dmt	DVU3013	0.17	-0.6
3,127,196	+	dmt	DVU3013	0.18	-0.5
3,127,285	+	dmt	DVU3013	0.23	+0.2
3,127,346	+	dmt	DVU3013	0.27	-0.3
3,127,389	+	dmt	DVU3013	0.29	+0.1
3,127,470	+	dmt	DVU3013	0.34	-0.1
3,127,470	+	dmt	DVU3013	0.34	+0.7
3,127,478	-	dmt	DVU3013	0.35	-0.6
3,127,480	+	dmt	DVU3013	0.35	-0.5
3,127,495	+	dmt	DVU3013	0.36	+0.1
3,127,495	+	dmt	DVU3013	0.36	+0.3
3,127,537	+	dmt	DVU3013	0.38	-1.3
3,127,537	+	dmt	DVU3013	0.38	+0.4
3,127,537	+	dmt	DVU3013	0.38	+0.5
3,127,545	-	dmt	DVU3013	0.39	+0.0
3,127,545	-	dmt	DVU3013	0.39	-0.2
3,127,642	+	dmt	DVU3013	0.44	-0.3
3,127,675	+	dmt	DVU3013	0.46	+0.1
3,127,829	+	dmt	DVU3013	0.55	-0.3
3,127,868	-	dmt	DVU3013	0.58	-0.1
3,127,868	-	dmt	DVU3013	0.58	+0.6
3,127,956	+	dmt	DVU3013	0.63	-0.8
3,128,068	+	dmt	DVU3013	0.69	+1.1
3,128,068	+	dmt	DVU3013	0.69	+0.4
3,128,068	+	dmt	DVU3013	0.69	-0.2
3,128,177	-	dmt	DVU3013	0.76	-0.8
3,128,180	+	dmt	DVU3013	0.76	+1.4
3,128,210	-	dmt	DVU3013	0.78	-0.8
3,128,244	+	dmt	DVU3013	0.80	-0.4
3,128,281	-	dmt	DVU3013	0.82	-0.6
3,128,360	+	dmt	DVU3013	0.86	+0.2
3,128,361	+	dmt	DVU3013	0.86	+0.3
3,128,368	-	dmt	DVU3013	0.87	+0.4
3,128,378	-	dmt	DVU3013	0.87	-0.2
3,128,380	+	dmt	DVU3013	0.88	+0.5
3,128,428	+				-0.3
3,128,457	+				+0.4
3,128,470	+				-0.4
3,128,483	+				+1.4
3,128,503	+				-0.1
3,128,516	-				-0.8
3,128,571	-				-1.0
3,128,631	-				-0.4
3,128,800	-		DVU3014	0.11	-0.2
3,128,833	-		DVU3014	0.12	+0.6
3,128,836	+		DVU3014	0.12	+0.7
3,128,839	-		DVU3014	0.12	-0.8
3,128,922	-		DVU3014	0.16	-0.0
3,128,935	-		DVU3014	0.17	+0.1
3,128,948	+		DVU3014	0.18	-0.2
3,129,038	-		DVU3014	0.22	-0.5
3,129,038	-		DVU3014	0.22	-0.2
3,129,038	-		DVU3014	0.22	-0.4
3,129,038	-		DVU3014	0.22	-0.5
3,129,038	-		DVU3014	0.22	-0.8
3,129,064	-		DVU3014	0.23	-0.3
3,129,080	+		DVU3014	0.24	+0.6
3,129,088	-		DVU3014	0.24	-0.8
3,129,137	+		DVU3014	0.27	+0.0
3,129,305	-		DVU3014	0.35	-1.0
3,129,343	-		DVU3014	0.36	-0.4
3,129,372	-		DVU3014	0.38	-0.0
3,129,408	-		DVU3014	0.40	+0.9
3,129,482	-		DVU3014	0.43	+1.4
3,129,529	+		DVU3014	0.45	-0.4
3,129,544	+		DVU3014	0.46	-0.2