Experiment: Formate/Acetate-Sulfate (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2962 and DVU2963 are separated by 3 nucleotides DVU2963 and DVU2964 are separated by 1 nucleotides DVU2964 and DVU2965 are separated by 119 nucleotides
DVU2962: DVU2962 - sensor histidine kinase (TIGR), at 3,068,730 to 3,070,463
DVU2962
DVU2963: DVU2963 - response regulator (TIGR), at 3,070,467 to 3,070,853
DVU2963
DVU2964: DVU2964 - hypothetical protein (TIGR), at 3,070,855 to 3,071,514
DVU2964
DVU2965: DVU2965 - hypothetical protein (TIGR), at 3,071,634 to 3,071,933
DVU2965
Position (kb)
3070
3071 Strain fitness (log2 ratio)
-1
0
1
2 at 3069.538 kb on - strand, within DVU2962 at 3069.578 kb on + strand, within DVU2962 at 3069.607 kb on - strand, within DVU2962 at 3069.754 kb on + strand, within DVU2962 at 3069.754 kb on + strand, within DVU2962 at 3069.762 kb on - strand, within DVU2962 at 3069.983 kb on + strand, within DVU2962 at 3069.988 kb on + strand, within DVU2962 at 3070.050 kb on + strand, within DVU2962 at 3070.114 kb on + strand, within DVU2962 at 3070.178 kb on - strand, within DVU2962 at 3070.178 kb on - strand, within DVU2962 at 3070.183 kb on - strand, within DVU2962 at 3070.457 kb on + strand at 3070.457 kb on + strand at 3070.490 kb on - strand at 3070.547 kb on - strand, within DVU2963 at 3070.593 kb on + strand, within DVU2963 at 3070.743 kb on - strand, within DVU2963 at 3070.751 kb on + strand, within DVU2963 at 3070.772 kb on + strand, within DVU2963 at 3070.813 kb on - strand, within DVU2963 at 3070.824 kb on + strand at 3070.908 kb on + strand at 3070.924 kb on - strand, within DVU2964 at 3070.948 kb on + strand, within DVU2964 at 3071.015 kb on + strand, within DVU2964 at 3071.015 kb on + strand, within DVU2964 at 3071.218 kb on - strand, within DVU2964 at 3071.224 kb on - strand, within DVU2964 at 3071.812 kb on + strand, within DVU2965 at 3071.812 kb on + strand, within DVU2965 at 3071.828 kb on - strand, within DVU2965
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/30-60 mM) remove 3,069,538 - DVU2962 0.47 -1.0 3,069,578 + DVU2962 0.49 +0.9 3,069,607 - DVU2962 0.51 -0.6 3,069,754 + DVU2962 0.59 +0.2 3,069,754 + DVU2962 0.59 -0.6 3,069,762 - DVU2962 0.60 -1.2 3,069,983 + DVU2962 0.72 +0.8 3,069,988 + DVU2962 0.73 -1.0 3,070,050 + DVU2962 0.76 -0.5 3,070,114 + DVU2962 0.80 -0.6 3,070,178 - DVU2962 0.84 -0.5 3,070,178 - DVU2962 0.84 -0.6 3,070,183 - DVU2962 0.84 -0.4 3,070,457 + -0.2 3,070,457 + -0.1 3,070,490 - -0.2 3,070,547 - DVU2963 0.21 +1.9 3,070,593 + DVU2963 0.33 -1.0 3,070,743 - DVU2963 0.71 -1.2 3,070,751 + DVU2963 0.73 -0.8 3,070,772 + DVU2963 0.79 +0.1 3,070,813 - DVU2963 0.89 -1.2 3,070,824 + -0.4 3,070,908 + +0.4 3,070,924 - DVU2964 0.10 -0.8 3,070,948 + DVU2964 0.14 -1.0 3,071,015 + DVU2964 0.24 -0.5 3,071,015 + DVU2964 0.24 -1.4 3,071,218 - DVU2964 0.55 -0.2 3,071,224 - DVU2964 0.56 -0.9 3,071,812 + DVU2965 0.59 +0.4 3,071,812 + DVU2965 0.59 -0.4 3,071,828 - DVU2965 0.65 -0.3
Or see this region's nucleotide sequence