Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2795

Experiment: Formate/Acetate-Sulfate (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-60 mM)
2,896,558	+		DVU2793	0.60	-0.8
2,896,571	-		DVU2793	0.61	-1.8
2,896,607	+		DVU2793	0.65	-0.8
2,896,653	-		DVU2793	0.69	-1.4
2,896,682	+		DVU2793	0.73	-1.0
2,896,724	+		DVU2793	0.77	-0.3
2,896,724	+		DVU2793	0.77	-0.9
2,896,734	+		DVU2793	0.78	-0.1
2,896,742	-		DVU2793	0.79	-0.4
2,896,776	-		DVU2793	0.82	-1.0
2,896,832	-		DVU2793	0.88	-1.8
2,896,913	-				-0.1
2,896,913	-				-0.2
2,897,067	+		DVU2794	0.21	-0.6
2,897,142	-		DVU2794	0.34	-1.4
2,897,144	+		DVU2794	0.34	-0.3
2,897,234	-		DVU2794	0.50	-0.7
2,897,271	+		DVU2794	0.56	-0.6
2,897,310	-		DVU2794	0.63	-0.5
2,897,360	+		DVU2794	0.72	-1.0
2,897,360	+		DVU2794	0.72	-1.4
2,897,477	+				-1.4
2,897,477	+				+0.6
2,897,485	-				-1.3
2,897,489	+				-0.7
2,897,511	-				-1.1
2,897,616	-	nqr4	DVU2795	0.12	+0.6
2,897,832	+	nqr4	DVU2795	0.44	-0.3
2,897,857	-	nqr4	DVU2795	0.48	+0.2
2,897,953	+	nqr4	DVU2795	0.62	-0.9
2,897,976	+	nqr4	DVU2795	0.66	-0.6
2,898,012	+	nqr4	DVU2795	0.71	-0.8
2,898,083	+	nqr4	DVU2795	0.82	-1.1
2,898,084	+	nqr4	DVU2795	0.82	-0.1
2,898,091	-	nqr4	DVU2795	0.83	-0.9
2,898,117	+	nqr4	DVU2795	0.87	-0.3
2,898,221	-				-1.1
2,898,383	-	b1627	DVU2796	0.29	-0.6
2,898,383	-	b1627	DVU2796	0.29	-0.3
2,898,433	-	b1627	DVU2796	0.38	-0.8
2,898,506	-	b1627	DVU2796	0.51	-0.7
2,898,573	+	b1627	DVU2796	0.62	-0.2
2,898,598	+	b1627	DVU2796	0.66	-0.6
2,898,682	+	b1627	DVU2796	0.81	-0.4
2,898,733	+				+0.2
2,898,733	+				-1.7
2,898,741	-				-1.5
2,898,929	-				-0.8
2,898,947	+				-1.0
2,899,203	+		DVU2797	0.39	-1.3