Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2475

Experiment: Formate/Acetate-Sulfate (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-60 mM)
2,582,427	-				-0.3
2,582,480	+				+0.0
2,582,488	-				+0.1
2,582,493	-				+0.0
2,582,545	+		DVU2473	0.22	-0.9
2,582,624	-		DVU2473	0.76	+1.0
2,582,702	-				-0.6
2,582,847	-		DVU2474	0.38	+0.3
2,582,902	-		DVU2474	0.49	+0.6
2,583,080	-		DVU2474	0.86	-0.8
2,583,149	+				-1.5
2,583,159	-				+0.5
2,583,193	-				+0.5
2,583,252	-				+0.8
2,583,358	-				+0.2
2,583,437	+				-0.5
2,583,509	-		DVU2475	0.12	+0.2
2,583,549	+		DVU2475	0.17	+0.6
2,583,557	-		DVU2475	0.18	-0.1
2,583,666	-		DVU2475	0.31	+0.1
2,583,676	-		DVU2475	0.32	+1.3
2,583,704	+		DVU2475	0.35	+0.5
2,583,711	+		DVU2475	0.36	+0.7
2,583,711	+		DVU2475	0.36	+0.1
2,583,711	+		DVU2475	0.36	-0.3
2,583,730	+		DVU2475	0.38	+1.6
2,583,752	+		DVU2475	0.41	+0.1
2,583,825	-		DVU2475	0.49	+0.4
2,583,859	+		DVU2475	0.53	+1.9
2,583,996	+		DVU2475	0.70	+0.2
2,584,004	-		DVU2475	0.71	+0.4
2,584,009	+		DVU2475	0.71	+0.3
2,584,017	-		DVU2475	0.72	+0.3
2,584,039	-		DVU2475	0.75	+0.6
2,584,041	+		DVU2475	0.75	+0.3
2,584,074	-		DVU2475	0.79	+0.2
2,584,188	-				-0.5
2,584,260	+				+0.1
2,584,301	-				+0.6
2,584,365	+				+0.2
2,584,380	-				-0.2
2,584,398	+	gltA	DVU2476	0.11	+1.0
2,584,398	+	gltA	DVU2476	0.11	+0.5
2,584,416	-	gltA	DVU2476	0.12	-0.4
2,584,426	-	gltA	DVU2476	0.13	-0.0
2,584,492	-	gltA	DVU2476	0.17	+1.9
2,584,492	-	gltA	DVU2476	0.17	+0.3
2,584,535	+	gltA	DVU2476	0.20	+0.3
2,584,543	-	gltA	DVU2476	0.21	+0.2
2,584,543	-	gltA	DVU2476	0.21	+0.2
2,584,656	+	gltA	DVU2476	0.29	+0.7
2,584,656	+	gltA	DVU2476	0.29	+0.1
2,584,667	+	gltA	DVU2476	0.30	+0.1
2,584,667	+	gltA	DVU2476	0.30	+0.4
2,584,683	+	gltA	DVU2476	0.31	+1.7
2,584,695	+	gltA	DVU2476	0.32	-0.6
2,584,756	-	gltA	DVU2476	0.36	+1.1
2,584,779	+	gltA	DVU2476	0.37	+0.1
2,584,820	-	gltA	DVU2476	0.40	-0.2
2,584,839	+	gltA	DVU2476	0.42	-0.3
2,585,014	+	gltA	DVU2476	0.54	-0.0
2,585,017	-	gltA	DVU2476	0.54	+0.4
2,585,022	-	gltA	DVU2476	0.54	-0.1
2,585,042	-	gltA	DVU2476	0.56	-0.2
2,585,069	-	gltA	DVU2476	0.58	+0.1
2,585,104	+	gltA	DVU2476	0.60	-0.2
2,585,106	+	gltA	DVU2476	0.60	-0.7
2,585,114	-	gltA	DVU2476	0.61	-0.2
2,585,139	-	gltA	DVU2476	0.63	+0.6
2,585,173	+	gltA	DVU2476	0.65	+0.2
2,585,173	+	gltA	DVU2476	0.65	+0.4
2,585,173	+	gltA	DVU2476	0.65	+0.5
2,585,173	+	gltA	DVU2476	0.65	-0.4
2,585,203	-	gltA	DVU2476	0.67	+0.7