Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2109

Experiment: Formate/Acetate-Sulfate (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-60 mM)
2,201,855	-				+0.0
2,202,073	-				-1.0
2,202,081	+				+0.1
2,202,097	+				+1.3
2,202,197	+		DVU2107	0.26	-0.4
2,202,197	+		DVU2107	0.26	-0.2
2,202,205	-		DVU2107	0.28	-0.1
2,202,205	-		DVU2107	0.28	+0.2
2,202,252	+		DVU2107	0.39	+0.6
2,202,252	+		DVU2107	0.39	-0.2
2,202,274	-		DVU2107	0.45	-0.5
2,202,340	-		DVU2107	0.61	-0.0
2,202,413	-		DVU2107	0.78	+1.2
2,202,413	-		DVU2107	0.78	-0.4
2,202,429	+		DVU2107	0.82	-0.3
2,202,889	+				-1.9
2,203,048	+	mrp	DVU2109	0.14	-0.8
2,203,079	-	mrp	DVU2109	0.16	-1.1
2,203,102	-	mrp	DVU2109	0.17	-2.0
2,203,131	+	mrp	DVU2109	0.19	-0.6
2,203,202	-	mrp	DVU2109	0.24	-0.1
2,203,301	+	mrp	DVU2109	0.31	+0.7
2,203,317	+	mrp	DVU2109	0.32	-0.7
2,203,361	-	mrp	DVU2109	0.35	-0.3
2,203,398	+	mrp	DVU2109	0.38	-0.2
2,203,548	+	mrp	DVU2109	0.48	-0.7
2,203,672	-	mrp	DVU2109	0.56	-1.0
2,203,709	+	mrp	DVU2109	0.59	-0.5
2,203,717	-	mrp	DVU2109	0.59	-2.2
2,203,740	+	mrp	DVU2109	0.61	-0.6
2,203,752	-	mrp	DVU2109	0.62	-0.4
2,203,773	-	mrp	DVU2109	0.63	+0.0
2,203,888	-	mrp	DVU2109	0.71	+0.0
2,204,034	-	mrp	DVU2109	0.81	-2.2
2,204,285	-				-1.2
2,204,299	-				-1.5
2,204,310	+				-0.4
2,204,431	+				-1.0
2,204,529	-				-0.1
2,204,702	+				+0.2
2,204,717	+				-0.5
2,204,723	-				+0.3
2,204,767	-				-0.1
2,204,779	-				+0.2
2,204,900	-	b2975	DVU2110	0.15	-0.0
2,204,916	+	b2975	DVU2110	0.16	-0.5
2,204,916	+	b2975	DVU2110	0.16	-0.3
2,204,962	+	b2975	DVU2110	0.18	+0.7
2,204,962	+	b2975	DVU2110	0.18	+0.1
2,204,962	+	b2975	DVU2110	0.18	+0.7
2,205,038	+	b2975	DVU2110	0.23	-0.1
2,205,039	-	b2975	DVU2110	0.23	+0.6
2,205,039	-	b2975	DVU2110	0.23	+0.2
2,205,062	-	b2975	DVU2110	0.25	+0.1
2,205,160	-	b2975	DVU2110	0.31	-0.5
2,205,184	+	b2975	DVU2110	0.32	+0.2
2,205,185	-	b2975	DVU2110	0.32	+0.1
2,205,251	-	b2975	DVU2110	0.36	-0.9