Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1349
Experiment: Formate/Acetate-Sulfate (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/30-60 mM) |
---|---|---|---|---|---|
remove | |||||
1,425,738 | - | DVU1347 | 0.24 | +0.3 | |
1,425,862 | + | DVU1347 | 0.38 | -1.3 | |
1,425,893 | - | DVU1347 | 0.41 | +0.2 | |
1,425,897 | + | DVU1347 | 0.41 | +0.2 | |
1,426,020 | - | DVU1347 | 0.55 | -0.1 | |
1,426,158 | + | DVU1347 | 0.70 | -0.4 | |
1,426,347 | + | +0.2 | |||
1,426,440 | + | -0.2 | |||
1,426,519 | - | xseB | DVU1348 | 0.30 | -1.9 |
1,426,549 | + | xseB | DVU1348 | 0.43 | +0.1 |
1,426,606 | + | xseB | DVU1348 | 0.66 | -0.5 |
1,426,690 | + | -0.0 | |||
1,426,926 | + | SelGGPS | DVU1349 | 0.25 | -0.7 |
1,426,978 | - | SelGGPS | DVU1349 | 0.31 | +0.3 |
1,427,164 | + | SelGGPS | DVU1349 | 0.53 | +1.1 |
1,427,184 | + | SelGGPS | DVU1349 | 0.55 | +0.3 |
1,427,416 | - | SelGGPS | DVU1349 | 0.82 | -1.0 |
1,427,548 | + | -0.6 | |||
1,427,548 | + | +0.2 | |||
1,427,556 | - | -0.9 | |||
1,427,556 | - | -0.0 |
Or see this region's nucleotide sequence