Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1292
Experiment: Formate/Acetate-Sulfate (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/30-60 mM) |
---|---|---|---|---|---|
remove | |||||
1,385,651 | - | DVU1292 | 0.55 | -1.4 | |
1,385,695 | - | DVU1292 | 0.80 | -0.7 | |
1,385,721 | - | -2.0 | |||
1,385,723 | + | -0.6 | |||
1,385,860 | + | +1.1 | |||
1,385,955 | + | DORF10446 | 0.14 | -0.1 | |
1,385,981 | - | DORF10446 | 0.17 | -0.9 | |
1,386,023 | + | DORF10446 | 0.21 | -0.3 | |
1,386,113 | + | DORF10446 | 0.30 | -1.2 | |
1,386,289 | + | DORF10446 | 0.49 | -0.2 | |
1,386,333 | + | DORF10446 | 0.54 | -0.3 | |
1,386,430 | + | DORF10446 | 0.64 | -0.3 | |
1,386,433 | - | DORF10446 | 0.64 | -0.1 | |
1,386,473 | + | DORF10446 | 0.68 | +0.0 | |
1,386,517 | + | DORF10446 | 0.73 | -1.0 | |
1,386,549 | - | DORF10446 | 0.76 | -0.4 | |
1,386,631 | - | DORF10446 | 0.85 | -0.3 | |
1,386,704 | + | -0.3 | |||
1,386,727 | + | +0.2 |
Or see this region's nucleotide sequence