Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1170
Experiment: Formate/Acetate-Sulfate (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/30-60 mM) |
---|---|---|---|---|---|
remove | |||||
1,262,798 | - | DVU1169 | 0.73 | +0.2 | |
1,262,848 | - | DVU1169 | 0.75 | +0.3 | |
1,262,987 | - | DVU1169 | 0.81 | -0.1 | |
1,262,995 | + | DVU1169 | 0.81 | -2.5 | |
1,263,005 | + | DVU1169 | 0.82 | -0.2 | |
1,263,205 | - | DVU1169 | 0.90 | -0.2 | |
1,263,268 | - | -0.2 | |||
1,263,270 | + | +0.9 | |||
1,263,278 | - | +0.4 | |||
1,263,574 | - | +0.7 | |||
1,263,736 | + | -2.1 | |||
1,263,744 | - | +1.1 | |||
1,263,774 | - | -0.1 | |||
1,263,774 | - | -0.2 | |||
1,263,802 | + | DVU1170 | 0.22 | -1.6 | |
1,263,919 | + | DVU1170 | 0.84 | -0.6 | |
1,264,027 | - | +0.3 | |||
1,264,037 | - | +0.6 | |||
1,264,121 | - | +1.3 | |||
1,264,237 | + | +0.2 | |||
1,264,255 | - | +0.0 |
Or see this region's nucleotide sequence