Experiment: Formate/Acetate-Sulfate (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0743 and DVU0744 overlap by 1 nucleotides DVU0744 and DVU0745 are separated by 232 nucleotides
DVU0743: DVU0743 - sensory box histidine kinase (TIGR), at 830,471 to 832,468
DVU0743
DVU0744: DVU0744 - sigma-54 dependent transcriptional regulator/response regulator (TIGR), at 832,468 to 834,177
DVU0744
DVU0745: DVU0745 - ABC transporter, periplasmic substrate-binding protein (TIGR), at 834,410 to 835,228
DVU0745
Position (kb) 832
833
834
835 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 831.598 kb on - strand, within DVU0743 at 831.641 kb on - strand, within DVU0743 at 831.656 kb on - strand, within DVU0743 at 831.727 kb on + strand, within DVU0743 at 831.815 kb on + strand, within DVU0743 at 831.858 kb on + strand, within DVU0743 at 831.937 kb on - strand, within DVU0743 at 831.937 kb on - strand, within DVU0743 at 831.965 kb on + strand, within DVU0743 at 831.973 kb on - strand, within DVU0743 at 831.974 kb on - strand, within DVU0743 at 832.007 kb on + strand, within DVU0743 at 832.030 kb on - strand, within DVU0743 at 832.030 kb on - strand, within DVU0743 at 832.065 kb on - strand, within DVU0743 at 832.065 kb on - strand, within DVU0743 at 832.157 kb on + strand, within DVU0743 at 832.162 kb on + strand, within DVU0743 at 832.162 kb on + strand, within DVU0743 at 832.167 kb on + strand, within DVU0743 at 832.167 kb on + strand, within DVU0743 at 832.175 kb on - strand, within DVU0743 at 832.298 kb on - strand at 832.347 kb on - strand at 832.348 kb on + strand at 832.390 kb on - strand at 832.390 kb on - strand at 832.390 kb on - strand at 832.400 kb on - strand at 832.438 kb on + strand at 832.444 kb on - strand at 832.634 kb on + strand at 832.651 kb on + strand, within DVU0744 at 832.687 kb on - strand, within DVU0744 at 832.696 kb on - strand, within DVU0744 at 832.767 kb on + strand, within DVU0744 at 832.789 kb on + strand, within DVU0744 at 832.832 kb on - strand, within DVU0744 at 832.890 kb on - strand, within DVU0744 at 832.999 kb on + strand, within DVU0744 at 833.166 kb on - strand, within DVU0744 at 833.269 kb on + strand, within DVU0744 at 833.277 kb on + strand, within DVU0744 at 833.340 kb on + strand, within DVU0744 at 833.404 kb on - strand, within DVU0744 at 833.411 kb on + strand, within DVU0744 at 833.419 kb on - strand, within DVU0744 at 833.612 kb on + strand, within DVU0744 at 833.612 kb on + strand, within DVU0744 at 833.681 kb on - strand, within DVU0744 at 833.774 kb on - strand, within DVU0744 at 833.798 kb on + strand, within DVU0744 at 833.855 kb on + strand, within DVU0744 at 833.857 kb on + strand, within DVU0744 at 833.865 kb on - strand, within DVU0744 at 833.865 kb on - strand, within DVU0744 at 833.890 kb on + strand, within DVU0744 at 833.890 kb on + strand, within DVU0744 at 833.890 kb on + strand, within DVU0744 at 833.948 kb on + strand, within DVU0744 at 833.956 kb on - strand, within DVU0744 at 833.956 kb on - strand, within DVU0744 at 833.966 kb on - strand, within DVU0744 at 833.966 kb on - strand, within DVU0744 at 834.143 kb on + strand at 834.556 kb on + strand, within DVU0745 at 834.572 kb on + strand, within DVU0745 at 834.603 kb on - strand, within DVU0745 at 834.604 kb on - strand, within DVU0745 at 834.791 kb on + strand, within DVU0745 at 834.857 kb on - strand, within DVU0745 at 834.928 kb on + strand, within DVU0745 at 835.041 kb on - strand, within DVU0745 at 835.097 kb on - strand, within DVU0745 at 835.116 kb on - strand, within DVU0745
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/30-60 mM) remove 831,598 - DVU0743 0.56 +0.2 831,641 - DVU0743 0.59 -0.0 831,656 - DVU0743 0.59 -0.2 831,727 + DVU0743 0.63 -1.2 831,815 + DVU0743 0.67 +0.8 831,858 + DVU0743 0.69 -0.2 831,937 - DVU0743 0.73 +0.9 831,937 - DVU0743 0.73 +0.3 831,965 + DVU0743 0.75 +0.4 831,973 - DVU0743 0.75 +0.1 831,974 - DVU0743 0.75 -2.9 832,007 + DVU0743 0.77 -0.1 832,030 - DVU0743 0.78 -1.6 832,030 - DVU0743 0.78 +0.4 832,065 - DVU0743 0.80 -1.2 832,065 - DVU0743 0.80 -0.0 832,157 + DVU0743 0.84 +0.3 832,162 + DVU0743 0.85 -0.1 832,162 + DVU0743 0.85 -0.6 832,167 + DVU0743 0.85 +0.0 832,167 + DVU0743 0.85 -0.4 832,175 - DVU0743 0.85 +0.5 832,298 - +1.5 832,347 - -0.3 832,348 + +0.0 832,390 - +0.3 832,390 - +0.0 832,390 - -0.4 832,400 - -0.1 832,438 + +0.1 832,444 - -0.8 832,634 + -0.8 832,651 + DVU0744 0.11 -0.8 832,687 - DVU0744 0.13 -0.6 832,696 - DVU0744 0.13 -0.8 832,767 + DVU0744 0.17 -0.1 832,789 + DVU0744 0.19 -0.6 832,832 - DVU0744 0.21 -1.0 832,890 - DVU0744 0.25 +0.9 832,999 + DVU0744 0.31 -0.6 833,166 - DVU0744 0.41 -2.6 833,269 + DVU0744 0.47 -1.1 833,277 + DVU0744 0.47 -0.6 833,340 + DVU0744 0.51 -0.8 833,404 - DVU0744 0.55 -0.1 833,411 + DVU0744 0.55 -0.9 833,419 - DVU0744 0.56 -2.0 833,612 + DVU0744 0.67 -1.0 833,612 + DVU0744 0.67 -1.0 833,681 - DVU0744 0.71 +0.3 833,774 - DVU0744 0.76 -1.6 833,798 + DVU0744 0.78 +0.7 833,855 + DVU0744 0.81 -0.9 833,857 + DVU0744 0.81 -0.5 833,865 - DVU0744 0.82 -0.7 833,865 - DVU0744 0.82 -1.2 833,890 + DVU0744 0.83 -0.9 833,890 + DVU0744 0.83 -0.5 833,890 + DVU0744 0.83 -0.5 833,948 + DVU0744 0.87 -0.6 833,956 - DVU0744 0.87 -0.6 833,956 - DVU0744 0.87 -0.9 833,966 - DVU0744 0.88 -3.0 833,966 - DVU0744 0.88 +0.4 834,143 + -1.9 834,556 + DVU0745 0.18 -0.1 834,572 + DVU0745 0.20 -0.9 834,603 - DVU0745 0.24 +0.0 834,604 - DVU0745 0.24 +0.1 834,791 + DVU0745 0.47 -0.0 834,857 - DVU0745 0.55 -0.7 834,928 + DVU0745 0.63 -0.2 835,041 - DVU0745 0.77 -0.8 835,097 - DVU0745 0.84 -0.1 835,116 - DVU0745 0.86 -0.4
Or see this region's nucleotide sequence