Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS36420
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
96,963 | - | -0.3 | |||
97,108 | - | BPHYT_RS36415 | 0.41 | -2.6 | |
97,153 | - | BPHYT_RS36415 | 0.50 | +0.5 | |
97,450 | - | +0.6 | |||
97,492 | - | +0.4 | |||
97,492 | - | +0.4 | |||
97,573 | - | -0.1 | |||
97,614 | + | +1.0 | |||
97,615 | - | -1.3 | |||
97,671 | - | -0.4 | |||
98,145 | + | BPHYT_RS36420 | 0.53 | +1.7 | |
98,146 | - | BPHYT_RS36420 | 0.53 | +0.9 | |
98,205 | + | BPHYT_RS36420 | 0.65 | +4.2 |
Or see this region's nucleotide sequence