Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS36405 and BPHYT_RS36410 overlap by 1 nucleotides BPHYT_RS36410 and BPHYT_RS36415 overlap by 11 nucleotides BPHYT_RS36415 and BPHYT_RS36420 are separated by 514 nucleotides
BPHYT_RS36405: BPHYT_RS36405 - hypothetical protein, at 93,194 to 94,993
_RS36405
BPHYT_RS36410: BPHYT_RS36410 - integrase family protein, at 94,993 to 96,930
_RS36410
BPHYT_RS36415: BPHYT_RS36415 - hypothetical protein, at 96,920 to 97,381
_RS36415
BPHYT_RS36420: BPHYT_RS36420 - hypothetical protein, at 97,896 to 98,369
_RS36420
Position (kb) 94
95
96
97 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 94.063 kb on - strand, within BPHYT_RS36405 at 94.224 kb on + strand, within BPHYT_RS36405 at 94.271 kb on + strand, within BPHYT_RS36405 at 94.271 kb on + strand, within BPHYT_RS36405 at 94.297 kb on - strand, within BPHYT_RS36405 at 94.435 kb on + strand, within BPHYT_RS36405 at 94.436 kb on - strand, within BPHYT_RS36405 at 94.481 kb on + strand, within BPHYT_RS36405 at 94.992 kb on - strand at 95.092 kb on - strand at 95.124 kb on - strand at 95.400 kb on - strand, within BPHYT_RS36410 at 95.436 kb on + strand, within BPHYT_RS36410 at 95.437 kb on - strand, within BPHYT_RS36410 at 95.437 kb on - strand, within BPHYT_RS36410 at 95.678 kb on - strand, within BPHYT_RS36410 at 95.747 kb on + strand, within BPHYT_RS36410 at 95.748 kb on - strand, within BPHYT_RS36410 at 95.828 kb on + strand, within BPHYT_RS36410 at 95.832 kb on + strand, within BPHYT_RS36410 at 95.832 kb on + strand, within BPHYT_RS36410 at 96.143 kb on - strand, within BPHYT_RS36410 at 96.611 kb on - strand at 96.655 kb on + strand, within BPHYT_RS36410 at 96.963 kb on - strand at 97.108 kb on - strand, within BPHYT_RS36415 at 97.153 kb on - strand, within BPHYT_RS36415 at 97.450 kb on - strand at 97.492 kb on - strand at 97.492 kb on - strand at 97.573 kb on - strand at 97.614 kb on + strand at 97.615 kb on - strand at 97.671 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 94,063 - BPHYT_RS36405 0.48 +0.5 94,224 + BPHYT_RS36405 0.57 +0.5 94,271 + BPHYT_RS36405 0.60 -3.0 94,271 + BPHYT_RS36405 0.60 +0.8 94,297 - BPHYT_RS36405 0.61 -0.4 94,435 + BPHYT_RS36405 0.69 +0.6 94,436 - BPHYT_RS36405 0.69 -0.7 94,481 + BPHYT_RS36405 0.71 +1.0 94,992 - -0.8 95,092 - -0.4 95,124 - +1.7 95,400 - BPHYT_RS36410 0.21 +2.9 95,436 + BPHYT_RS36410 0.23 +1.5 95,437 - BPHYT_RS36410 0.23 +2.3 95,437 - BPHYT_RS36410 0.23 -2.9 95,678 - BPHYT_RS36410 0.35 +2.2 95,747 + BPHYT_RS36410 0.39 -2.9 95,748 - BPHYT_RS36410 0.39 +0.0 95,828 + BPHYT_RS36410 0.43 +1.4 95,832 + BPHYT_RS36410 0.43 +0.9 95,832 + BPHYT_RS36410 0.43 +2.8 96,143 - BPHYT_RS36410 0.59 -0.1 96,611 - +2.3 96,655 + BPHYT_RS36410 0.86 +2.0 96,963 - -0.3 97,108 - BPHYT_RS36415 0.41 -2.6 97,153 - BPHYT_RS36415 0.50 +0.5 97,450 - +0.6 97,492 - +0.4 97,492 - +0.4 97,573 - -0.1 97,614 + +1.0 97,615 - -1.3 97,671 - -0.4
Or see this region's nucleotide sequence