Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34840
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
3,420,895 | + | BPHYT_RS34835 | 0.32 | -0.2 | |
3,420,896 | - | BPHYT_RS34835 | 0.32 | -0.4 | |
3,421,106 | + | BPHYT_RS34835 | 0.50 | +0.0 | |
3,421,106 | + | BPHYT_RS34835 | 0.50 | -0.4 | |
3,421,436 | + | BPHYT_RS34835 | 0.79 | +0.1 | |
3,421,542 | - | BPHYT_RS34835 | 0.88 | +0.2 | |
3,421,592 | + | +0.0 | |||
3,421,593 | - | +2.0 | |||
3,421,749 | - | +0.1 | |||
3,421,766 | + | -1.6 | |||
3,421,767 | - | +3.2 | |||
3,421,767 | - | +1.3 | |||
3,422,326 | + | -0.9 | |||
3,422,354 | + | -0.5 | |||
3,422,355 | - | +0.2 | |||
3,422,363 | - | +0.6 | |||
3,422,363 | - | +0.3 | |||
3,422,373 | - | +0.6 | |||
3,422,389 | - | -0.3 | |||
3,422,435 | - | -0.0 |
Or see this region's nucleotide sequence