Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34515

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,349,993	+		BPHYT_RS34510	0.39	+0.0
3,350,050	+		BPHYT_RS34510	0.43	+0.3
3,350,050	+		BPHYT_RS34510	0.43	-1.1
3,350,051	-		BPHYT_RS34510	0.43	-0.8
3,350,252	+		BPHYT_RS34510	0.56	+0.2
3,350,252	+		BPHYT_RS34510	0.56	-2.0
3,350,370	-		BPHYT_RS34510	0.63	+0.8
3,350,455	-		BPHYT_RS34510	0.68	+4.3
3,350,564	+		BPHYT_RS34510	0.75	-0.1
3,350,564	+		BPHYT_RS34510	0.75	+1.2
3,350,565	-		BPHYT_RS34510	0.75	-0.1
3,350,735	-		BPHYT_RS34510	0.86	-1.0
3,350,735	-		BPHYT_RS34510	0.86	-2.7
3,350,740	+		BPHYT_RS34510	0.86	-0.3
3,350,741	-		BPHYT_RS34510	0.86	-0.1
3,350,810	-				-2.4
3,351,011	+				-0.5
3,351,011	+				+0.6
3,351,056	+				+0.1
3,351,056	+				+0.6
3,351,056	+				-0.6
3,351,056	+				-2.3
3,351,056	+				-0.1
3,351,057	-				+0.6
3,351,057	-				+0.4
3,351,380	-		BPHYT_RS34515	0.31	+0.3
3,351,402	+		BPHYT_RS34515	0.33	-2.2
3,351,403	-		BPHYT_RS34515	0.33	-0.4
3,351,404	+		BPHYT_RS34515	0.33	-0.3
3,351,404	+		BPHYT_RS34515	0.33	+0.2
3,351,405	-		BPHYT_RS34515	0.33	+0.2
3,351,515	+		BPHYT_RS34515	0.41	-0.3
3,351,516	-		BPHYT_RS34515	0.41	-0.0
3,351,516	-		BPHYT_RS34515	0.41	+1.2
3,351,841	-		BPHYT_RS34515	0.66	-0.9
3,351,841	-		BPHYT_RS34515	0.66	+0.5
3,351,841	-		BPHYT_RS34515	0.66	+0.8
3,351,878	+		BPHYT_RS34515	0.68	+0.5
3,352,034	+		BPHYT_RS34515	0.80	+0.6
3,352,034	+		BPHYT_RS34515	0.80	-0.0
3,352,071	-		BPHYT_RS34515	0.83	+0.5
3,352,071	-		BPHYT_RS34515	0.83	-2.7
3,352,350	+				+0.5
3,352,351	-				-0.3
3,352,375	+				+0.1
3,352,384	-				-1.9
3,352,628	-		BPHYT_RS34520	0.28	-0.3
3,352,628	-		BPHYT_RS34520	0.28	+0.5
3,352,798	+		BPHYT_RS34520	0.46	+0.3
3,352,802	+		BPHYT_RS34520	0.47	+0.3
3,352,803	-		BPHYT_RS34520	0.47	-0.2
3,352,871	+		BPHYT_RS34520	0.54	-0.3
3,353,066	-		BPHYT_RS34520	0.74	+0.3
3,353,162	+		BPHYT_RS34520	0.84	+4.5
3,353,180	+		BPHYT_RS34520	0.86	+1.1