Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34440

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,334,412	-		BPHYT_RS34435	0.41	+2.2
3,334,469	-		BPHYT_RS34435	0.45	-0.4
3,334,477	+		BPHYT_RS34435	0.46	+2.2
3,334,613	+		BPHYT_RS34435	0.57	+2.3
3,334,614	-		BPHYT_RS34435	0.57	-0.5
3,334,658	+		BPHYT_RS34435	0.60	+2.0
3,334,661	-		BPHYT_RS34435	0.60	+0.5
3,334,661	-		BPHYT_RS34435	0.60	+0.4
3,334,661	-		BPHYT_RS34435	0.60	-0.0
3,334,990	+		BPHYT_RS34435	0.86	+0.2
3,334,991	-		BPHYT_RS34435	0.86	-2.0
3,335,095	+				+0.2
3,335,107	+				-3.1
3,335,107	+				+0.5
3,335,107	+				+0.3
3,335,127	+				-0.1
3,335,224	+				+1.0
3,335,403	-				+0.1
3,335,478	+		BPHYT_RS34440	0.11	-0.4
3,335,671	-		BPHYT_RS34440	0.26	-0.0
3,335,812	+		BPHYT_RS34440	0.38	-0.4
3,335,813	-		BPHYT_RS34440	0.38	-0.4
3,337,162	-		BPHYT_RS34445	0.59	+1.2
3,337,162	-		BPHYT_RS34445	0.59	-0.3
3,337,162	-		BPHYT_RS34445	0.59	-2.6
3,337,162	-		BPHYT_RS34445	0.59	-3.3
3,337,230	+		BPHYT_RS34445	0.69	-0.2
3,337,231	-		BPHYT_RS34445	0.69	-2.7
3,337,392	-				+0.8
3,337,547	+				-1.2