Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33915

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,199,865	+		BPHYT_RS33905	0.19	+0.8
3,200,256	-		BPHYT_RS33905	0.78	-3.6
3,200,380	+				-2.0
3,200,668	-				+0.9
3,200,728	-				-2.6
3,200,982	-		BPHYT_RS33915	0.24	-3.4
3,200,982	-		BPHYT_RS33915	0.24	-2.3
3,201,087	-		BPHYT_RS33915	0.31	-0.7
3,201,278	+		BPHYT_RS33915	0.45	-1.8
3,201,783	-		BPHYT_RS33915	0.80	-0.9
3,201,783	-		BPHYT_RS33915	0.80	-1.9
3,201,870	+		BPHYT_RS33915	0.87	-1.9
3,201,870	+		BPHYT_RS33915	0.87	+1.1
3,201,871	-		BPHYT_RS33915	0.87	-2.9
3,201,984	-				-1.6
3,202,043	+				-1.1
3,202,044	-				-0.9
3,202,063	-				+0.5
3,202,072	-				+0.3
3,202,074	+				-2.0
3,202,075	-				+0.6
3,202,191	+				-0.2
3,202,337	+				+1.1
3,202,338	-				+0.5
3,202,338	-				+0.8
3,202,338	-				-2.6
3,202,338	-				+0.7
3,202,344	+				+0.8
3,202,587	-		BPHYT_RS33920	0.15	+4.5
3,202,587	-		BPHYT_RS33920	0.15	+2.3
3,202,625	+		BPHYT_RS33920	0.18	+1.9
3,202,625	+		BPHYT_RS33920	0.18	-0.5
3,202,749	-		BPHYT_RS33920	0.27	+5.4
3,202,749	-		BPHYT_RS33920	0.27	+2.1
3,202,757	+		BPHYT_RS33920	0.28	+1.4
3,202,757	+		BPHYT_RS33920	0.28	+0.9
3,202,915	-		BPHYT_RS33920	0.40	+2.1
3,203,054	+		BPHYT_RS33920	0.51	+2.1
3,203,055	-		BPHYT_RS33920	0.51	+1.7