Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33590

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,119,383	-		BPHYT_RS33580	0.65	+4.1
3,119,394	-				-0.2
3,119,394	-		BPHYT_RS33580	0.66	+3.1
3,119,461	-		BPHYT_RS33580	0.73	+3.1
3,119,461	-		BPHYT_RS33580	0.73	+6.3
3,119,461	-		BPHYT_RS33580	0.73	+2.0
3,119,635	-				+2.7
3,119,696	-				+0.9
3,119,696	-				-2.8
3,119,696	-				+0.9
3,119,696	-				+1.0
3,119,734	-		BPHYT_RS33585	0.14	+0.5
3,120,005	-				+1.9
3,120,017	-				+0.9
3,120,017	-				+1.1
3,120,183	+				+0.8
3,120,210	+				-0.0
3,120,210	+				-1.3
3,120,228	-				-0.9
3,120,351	-				+1.0
3,120,351	-				+1.7
3,120,411	-		BPHYT_RS33590	0.11	+1.7
3,120,608	+		BPHYT_RS33590	0.29	+0.1
3,120,608	+		BPHYT_RS33590	0.29	+0.4
3,120,609	-		BPHYT_RS33590	0.29	+1.5
3,120,818	+		BPHYT_RS33590	0.48	+0.5
3,120,818	+		BPHYT_RS33590	0.48	-1.1
3,120,818	+		BPHYT_RS33590	0.48	+0.2
3,120,819	-		BPHYT_RS33590	0.48	-0.1
3,120,819	-		BPHYT_RS33590	0.48	+0.3
3,120,857	+		BPHYT_RS33590	0.51	+0.9
3,120,857	+		BPHYT_RS33590	0.51	+0.2
3,120,858	-		BPHYT_RS33590	0.52	+1.4
3,120,935	+		BPHYT_RS33590	0.59	+0.7
3,120,936	-		BPHYT_RS33590	0.59	+1.1
3,120,993	-		BPHYT_RS33590	0.64	+0.7
3,121,067	+		BPHYT_RS33590	0.70	+2.8
3,121,067	+		BPHYT_RS33590	0.70	+0.3
3,121,067	+		BPHYT_RS33590	0.70	+0.0
3,121,067	+		BPHYT_RS33590	0.70	+0.4
3,121,068	-		BPHYT_RS33590	0.71	+0.1
3,121,166	+		BPHYT_RS33590	0.79	+1.4
3,121,166	+		BPHYT_RS33590	0.79	-2.3
3,121,167	-		BPHYT_RS33590	0.79	+2.7
3,121,167	-		BPHYT_RS33590	0.79	+0.6
3,121,226	+		BPHYT_RS33590	0.85	+0.3
3,121,227	-		BPHYT_RS33590	0.85	-0.3
3,121,486	+				+0.1
3,121,486	+				-0.9
3,121,486	+				+0.1
3,121,486	+				+0.1
3,121,487	-				-0.2
3,121,574	+				+0.3
3,121,575	-				-0.4
3,121,575	-				-1.1
3,121,582	-				+0.2
3,121,590	-				-0.5
3,121,628	+				-0.9
3,121,628	+				-0.0
3,121,629	-				-0.3
3,121,629	-				+0.1
3,121,746	-		BPHYT_RS33595	0.15	-0.0
3,121,775	+		BPHYT_RS33595	0.19	+0.2
3,121,907	+		BPHYT_RS33595	0.34	-0.6
3,121,928	+		BPHYT_RS33595	0.36	-3.7
3,121,928	+		BPHYT_RS33595	0.36	-1.0
3,121,928	+		BPHYT_RS33595	0.36	+0.7
3,121,929	-		BPHYT_RS33595	0.36	-1.6
3,122,278	+		BPHYT_RS33595	0.76	+0.6
3,122,278	+		BPHYT_RS33595	0.76	-0.0
3,122,278	+		BPHYT_RS33595	0.76	-0.3
3,122,278	+		BPHYT_RS33595	0.76	-0.7
3,122,278	+		BPHYT_RS33595	0.76	-0.1
3,122,278	+		BPHYT_RS33595	0.76	+0.5
3,122,279	-		BPHYT_RS33595	0.77	+0.1