Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31830
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,700,122 | + | BPHYT_RS31825 | 0.15 | +0.3 | |
2,700,150 | - | BPHYT_RS31825 | 0.18 | -0.2 | |
2,700,261 | - | BPHYT_RS31825 | 0.29 | +0.8 | |
2,700,485 | + | BPHYT_RS31825 | 0.50 | +0.6 | |
2,701,150 | + | BPHYT_RS31830 | 0.12 | +0.7 | |
2,701,220 | + | BPHYT_RS31830 | 0.35 | -0.4 | |
2,701,600 | - | +0.5 | |||
2,701,617 | - | +0.5 | |||
2,702,082 | - | +2.1 | |||
2,702,189 | + | -0.6 | |||
2,702,398 | - | BPHYT_RS31840 | 0.49 | -2.1 |
Or see this region's nucleotide sequence