Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31675
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,661,914 | + | BPHYT_RS31670 | 0.16 | -0.5 | |
2,662,153 | - | BPHYT_RS31670 | 0.87 | +0.8 | |
2,662,227 | - | +0.4 | |||
2,662,554 | + | BPHYT_RS31675 | 0.18 | +0.4 | |
2,662,696 | - | BPHYT_RS31675 | 0.61 | +0.9 | |
2,662,923 | - | -1.0 | |||
2,662,938 | - | +0.1 | |||
2,662,940 | + | -0.8 | |||
2,662,944 | + | +1.1 | |||
2,663,263 | - | BPHYT_RS31680 | 0.35 | +1.2 | |
2,663,354 | + | BPHYT_RS31680 | 0.45 | +0.1 | |
2,663,378 | + | BPHYT_RS31680 | 0.48 | -0.1 | |
2,663,527 | - | BPHYT_RS31680 | 0.64 | +3.2 | |
2,663,647 | - | BPHYT_RS31680 | 0.78 | -1.4 |
Or see this region's nucleotide sequence