Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS28255 and BPHYT_RS28260 are separated by 120 nucleotides BPHYT_RS28260 and BPHYT_RS28265 are separated by 19 nucleotides BPHYT_RS28265 and BPHYT_RS28270 are separated by 33 nucleotides
BPHYT_RS28255: BPHYT_RS28255 - hypothetical protein, at 1,896,824 to 1,897,033
_RS28255
BPHYT_RS28260: BPHYT_RS28260 - oxidoreductase, at 1,897,154 to 1,897,852
_RS28260
BPHYT_RS28265: BPHYT_RS28265 - hypothetical protein, at 1,897,872 to 1,898,879
_RS28265
BPHYT_RS28270: BPHYT_RS28270 - ABC transporter substrate-binding protein, at 1,898,913 to 1,900,034
_RS28270
Position (kb) 1897
1898
1899 Strain fitness (log2 ratio) -1
0
1 at 1896.897 kb on + strand, within BPHYT_RS28255 at 1897.397 kb on + strand, within BPHYT_RS28260 at 1897.663 kb on + strand, within BPHYT_RS28260 at 1897.697 kb on - strand, within BPHYT_RS28260 at 1898.209 kb on + strand, within BPHYT_RS28265 at 1898.377 kb on - strand, within BPHYT_RS28265 at 1898.377 kb on - strand, within BPHYT_RS28265 at 1898.377 kb on - strand, within BPHYT_RS28265 at 1898.618 kb on + strand, within BPHYT_RS28265 at 1898.621 kb on - strand, within BPHYT_RS28265 at 1898.621 kb on - strand, within BPHYT_RS28265 at 1898.696 kb on + strand, within BPHYT_RS28265 at 1898.923 kb on + strand at 1898.953 kb on + strand at 1898.954 kb on - strand at 1899.002 kb on - strand at 1899.002 kb on - strand at 1899.116 kb on - strand, within BPHYT_RS28270 at 1899.226 kb on + strand, within BPHYT_RS28270 at 1899.691 kb on + strand, within BPHYT_RS28270 at 1899.728 kb on - strand, within BPHYT_RS28270
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,896,897 + BPHYT_RS28255 0.35 -0.4 1,897,397 + BPHYT_RS28260 0.35 +0.2 1,897,663 + BPHYT_RS28260 0.73 -1.4 1,897,697 - BPHYT_RS28260 0.78 +0.8 1,898,209 + BPHYT_RS28265 0.33 +0.1 1,898,377 - BPHYT_RS28265 0.50 +0.4 1,898,377 - BPHYT_RS28265 0.50 -0.7 1,898,377 - BPHYT_RS28265 0.50 +0.7 1,898,618 + BPHYT_RS28265 0.74 +1.0 1,898,621 - BPHYT_RS28265 0.74 +1.0 1,898,621 - BPHYT_RS28265 0.74 -0.6 1,898,696 + BPHYT_RS28265 0.82 +0.6 1,898,923 + +0.7 1,898,953 + +0.6 1,898,954 - +0.3 1,899,002 - +0.5 1,899,002 - +0.2 1,899,116 - BPHYT_RS28270 0.18 -0.6 1,899,226 + BPHYT_RS28270 0.28 -0.2 1,899,691 + BPHYT_RS28270 0.69 -0.6 1,899,728 - BPHYT_RS28270 0.73 -0.6
Or see this region's nucleotide sequence