Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS27685 and BPHYT_RS27690 are separated by 9 nucleotides BPHYT_RS27690 and BPHYT_RS27695 are separated by 81 nucleotides BPHYT_RS27695 and BPHYT_RS27700 are separated by 159 nucleotides
BPHYT_RS27685: BPHYT_RS27685 - ornithine carbamoyltransferase, at 1,777,157 to 1,778,155
_RS27685
BPHYT_RS27690: BPHYT_RS27690 - carbamate kinase, at 1,778,165 to 1,779,073
_RS27690
BPHYT_RS27695: BPHYT_RS27695 - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase, at 1,779,155 to 1,780,558
_RS27695
BPHYT_RS27700: BPHYT_RS27700 - universal stress protein A, at 1,780,718 to 1,781,554
_RS27700
Position (kb) 1779
1780
1781 Strain fitness (log2 ratio) -1
0
1 at 1778.549 kb on + strand, within BPHYT_RS27690 at 1778.785 kb on + strand, within BPHYT_RS27690 at 1779.079 kb on + strand at 1779.079 kb on + strand at 1779.408 kb on - strand, within BPHYT_RS27695 at 1779.408 kb on - strand, within BPHYT_RS27695 at 1779.408 kb on - strand, within BPHYT_RS27695 at 1780.384 kb on - strand, within BPHYT_RS27695 at 1780.403 kb on + strand, within BPHYT_RS27695 at 1780.435 kb on - strand at 1780.435 kb on - strand at 1780.724 kb on + strand at 1780.724 kb on + strand at 1780.827 kb on + strand, within BPHYT_RS27700 at 1780.830 kb on - strand, within BPHYT_RS27700 at 1780.830 kb on - strand, within BPHYT_RS27700 at 1780.886 kb on + strand, within BPHYT_RS27700 at 1780.890 kb on - strand, within BPHYT_RS27700 at 1781.176 kb on + strand, within BPHYT_RS27700
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,778,549 + BPHYT_RS27690 0.42 +0.8 1,778,785 + BPHYT_RS27690 0.68 +0.1 1,779,079 + +0.4 1,779,079 + -0.4 1,779,408 - BPHYT_RS27695 0.18 +1.1 1,779,408 - BPHYT_RS27695 0.18 -0.8 1,779,408 - BPHYT_RS27695 0.18 -0.0 1,780,384 - BPHYT_RS27695 0.88 -0.1 1,780,403 + BPHYT_RS27695 0.89 +0.5 1,780,435 - +0.7 1,780,435 - +0.8 1,780,724 + -1.3 1,780,724 + +0.4 1,780,827 + BPHYT_RS27700 0.13 +0.6 1,780,830 - BPHYT_RS27700 0.13 -0.6 1,780,830 - BPHYT_RS27700 0.13 +0.4 1,780,886 + BPHYT_RS27700 0.20 -0.2 1,780,890 - BPHYT_RS27700 0.21 -1.2 1,781,176 + BPHYT_RS27700 0.55 -1.0
Or see this region's nucleotide sequence