Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27065
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
1,645,082 | + | -4.4 | |||
1,645,142 | + | +1.6 | |||
1,645,142 | + | -1.3 | |||
1,645,792 | + | BPHYT_RS27060 | 0.76 | -1.8 | |
1,645,795 | + | BPHYT_RS27060 | 0.77 | -0.8 | |
1,645,796 | - | BPHYT_RS27060 | 0.77 | -3.8 | |
1,646,367 | + | BPHYT_RS27065 | 0.75 | -0.8 | |
1,646,603 | - | +0.7 | |||
1,646,740 | + | BPHYT_RS27070 | 0.14 | +0.4 | |
1,646,741 | - | BPHYT_RS27070 | 0.14 | +0.3 | |
1,647,307 | + | BPHYT_RS27070 | 0.57 | +1.9 | |
1,647,308 | - | BPHYT_RS27070 | 0.57 | +1.4 | |
1,647,311 | + | BPHYT_RS27070 | 0.57 | +0.7 | |
1,647,311 | + | BPHYT_RS27070 | 0.57 | -1.2 | |
1,647,312 | - | BPHYT_RS27070 | 0.57 | -0.0 | |
1,647,461 | + | BPHYT_RS27070 | 0.69 | +1.0 | |
1,647,461 | + | BPHYT_RS27070 | 0.69 | -0.3 | |
1,647,463 | + | BPHYT_RS27070 | 0.69 | +1.3 |
Or see this region's nucleotide sequence