Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26840
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
1,592,428 | - | BPHYT_RS26835 | 0.70 | +0.4 | |
1,592,526 | + | BPHYT_RS26835 | 0.79 | +0.3 | |
1,592,527 | - | BPHYT_RS26835 | 0.79 | -0.3 | |
1,592,702 | + | +0.4 | |||
1,592,702 | + | +1.3 | |||
1,592,720 | + | +1.5 | |||
1,592,871 | + | -1.1 | |||
1,592,871 | + | -0.6 | |||
1,592,871 | + | +0.8 | |||
1,592,871 | + | +0.1 | |||
1,592,874 | - | +1.2 | |||
1,592,903 | + | +1.0 | |||
1,593,051 | + | +0.4 | |||
1,593,654 | - | BPHYT_RS26840 | 0.37 | -0.0 | |
1,593,654 | - | BPHYT_RS26840 | 0.37 | -0.3 | |
1,593,891 | + | BPHYT_RS26840 | 0.52 | -0.6 | |
1,593,967 | + | BPHYT_RS26840 | 0.57 | -2.6 | |
1,594,300 | + | BPHYT_RS26840 | 0.78 | +0.8 | |
1,594,473 | - | BPHYT_RS26840 | 0.89 | -0.3 | |
1,594,619 | - | +0.6 | |||
1,594,809 | + | +0.2 | |||
1,594,810 | - | +0.5 | |||
1,594,810 | - | -0.5 | |||
1,595,438 | - | -0.6 |
Or see this region's nucleotide sequence