Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26415
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
1,498,243 | - | BPHYT_RS26405 | 0.79 | -0.0 | |
1,498,428 | + | +1.5 | |||
1,498,628 | + | +0.5 | |||
1,498,629 | - | +0.3 | |||
1,498,713 | + | BPHYT_RS26410 | 0.12 | -0.0 | |
1,498,730 | - | BPHYT_RS26410 | 0.16 | +1.3 | |
1,498,732 | - | BPHYT_RS26410 | 0.17 | +0.7 | |
1,499,173 | - | -0.8 | |||
1,499,232 | + | -0.3 | |||
1,499,241 | + | -1.4 | |||
1,499,523 | + | BPHYT_RS26415 | 0.47 | -1.1 | |
1,499,679 | + | BPHYT_RS26415 | 0.71 | -2.4 | |
1,499,788 | - | BPHYT_RS26415 | 0.87 | -1.4 | |
1,500,060 | - | +0.3 | |||
1,500,096 | + | BPHYT_RS26420 | 0.13 | +0.7 | |
1,500,504 | - | BPHYT_RS26420 | 0.61 | -0.0 |
Or see this region's nucleotide sequence