Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26345 and BPHYT_RS26350 are separated by 155 nucleotides BPHYT_RS26350 and BPHYT_RS26355 are separated by 51 nucleotides BPHYT_RS26355 and BPHYT_RS26360 are separated by 199 nucleotides BPHYT_RS26360 and BPHYT_RS26365 are separated by 160 nucleotides
BPHYT_RS26345: BPHYT_RS26345 - hypothetical protein, at 1,484,597 to 1,484,857
_RS26345
BPHYT_RS26350: BPHYT_RS26350 - hypothetical protein, at 1,485,013 to 1,485,249
_RS26350
BPHYT_RS26355: BPHYT_RS26355 - hypothetical protein, at 1,485,301 to 1,485,546
_RS26355
BPHYT_RS26360: BPHYT_RS26360 - hypothetical protein, at 1,485,746 to 1,485,943
_RS26360
BPHYT_RS26365: BPHYT_RS26365 - oxidoreductase molybdopterin subunit, at 1,486,104 to 1,488,470
_RS26365
Position (kb) 1485
1486 Strain fitness (log2 ratio) -1
0
1
2
3 at 1484.302 kb on + strand at 1484.303 kb on - strand at 1484.773 kb on - strand, within BPHYT_RS26345 at 1485.248 kb on - strand at 1485.467 kb on + strand, within BPHYT_RS26355 at 1485.492 kb on - strand, within BPHYT_RS26355
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,484,302 + +0.8 1,484,303 - +2.9 1,484,773 - BPHYT_RS26345 0.67 +1.0 1,485,248 - -1.4 1,485,467 + BPHYT_RS26355 0.67 +1.4 1,485,492 - BPHYT_RS26355 0.78 -1.4
Or see this region's nucleotide sequence