Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS24475 and BPHYT_RS24480 are separated by 25 nucleotides BPHYT_RS24480 and BPHYT_RS24485 overlap by 4 nucleotides BPHYT_RS24485 and BPHYT_RS24490 are separated by 91 nucleotides BPHYT_RS24490 and BPHYT_RS24495 are separated by 193 nucleotides
BPHYT_RS24475: BPHYT_RS24475 - AraC family transcriptional regulator, at 1,060,756 to 1,061,724
_RS24475
BPHYT_RS24480: BPHYT_RS24480 - molybdopterin binding oxidoreductase, at 1,061,750 to 1,062,526
_RS24480
BPHYT_RS24485: BPHYT_RS24485 - thioredoxin reductase, at 1,062,523 to 1,063,158
_RS24485
BPHYT_RS24490: BPHYT_RS24490 - hypothetical protein, at 1,063,250 to 1,063,882
_RS24490
BPHYT_RS24495: BPHYT_RS24495 - transcriptional regulator, at 1,064,076 to 1,064,747
_RS24495
Position (kb) 1062
1063
1064 Strain fitness (log2 ratio) -2
-1
0
1 at 1061.751 kb on + strand at 1061.752 kb on - strand at 1061.973 kb on + strand, within BPHYT_RS24480 at 1062.193 kb on - strand, within BPHYT_RS24480 at 1062.232 kb on - strand, within BPHYT_RS24480 at 1062.766 kb on + strand, within BPHYT_RS24485 at 1062.767 kb on - strand, within BPHYT_RS24485 at 1062.780 kb on - strand, within BPHYT_RS24485 at 1062.780 kb on - strand, within BPHYT_RS24485 at 1062.803 kb on + strand, within BPHYT_RS24485 at 1062.926 kb on + strand, within BPHYT_RS24485 at 1062.927 kb on - strand, within BPHYT_RS24485 at 1063.050 kb on - strand, within BPHYT_RS24485 at 1063.178 kb on - strand at 1063.391 kb on - strand, within BPHYT_RS24490 at 1063.444 kb on + strand, within BPHYT_RS24490 at 1063.623 kb on + strand, within BPHYT_RS24490 at 1063.623 kb on + strand, within BPHYT_RS24490 at 1063.624 kb on - strand, within BPHYT_RS24490 at 1063.990 kb on + strand at 1063.990 kb on + strand at 1064.148 kb on + strand, within BPHYT_RS24495
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,061,751 + +1.5 1,061,752 - -0.7 1,061,973 + BPHYT_RS24480 0.29 -0.9 1,062,193 - BPHYT_RS24480 0.57 -1.0 1,062,232 - BPHYT_RS24480 0.62 +0.4 1,062,766 + BPHYT_RS24485 0.38 +1.1 1,062,767 - BPHYT_RS24485 0.38 +0.2 1,062,780 - BPHYT_RS24485 0.40 -0.3 1,062,780 - BPHYT_RS24485 0.40 -0.3 1,062,803 + BPHYT_RS24485 0.44 +0.2 1,062,926 + BPHYT_RS24485 0.63 +0.4 1,062,927 - BPHYT_RS24485 0.64 -1.8 1,063,050 - BPHYT_RS24485 0.83 -0.9 1,063,178 - +0.6 1,063,391 - BPHYT_RS24490 0.22 +0.1 1,063,444 + BPHYT_RS24490 0.31 -0.3 1,063,623 + BPHYT_RS24490 0.59 -2.0 1,063,623 + BPHYT_RS24490 0.59 -1.5 1,063,624 - BPHYT_RS24490 0.59 +1.7 1,063,990 + -0.7 1,063,990 + -0.6 1,064,148 + BPHYT_RS24495 0.11 -0.4
Or see this region's nucleotide sequence